| Protein: | PAL1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 725 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAL1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1072.0 | [0..1] | [725..1] |
|
Region A: Residues: [1-725] |
1 11 21 31 41 51
| | | | | |
1 MEINGAHKSN GGGVDAMLCG GDIKTKNMVI NAEDPLNWGA AAEQMKGSHL DEVKRMVAEF 60
61 RKPVVNLGGE TLTIGQVAAI STIGNSVKVE LSETARAGVN ASSDWVMESM NKGTDSYGVT 120
121 TGFGATSHRR TKNGVALQKE LIRFLNAGIF GSTKETSHTL PHSATRAAML VRINTLLQGF 180
181 SGIRFEILEA ITSFLNNNIT PSLPLRGTIT ASGDLVPLSY IAGLLTGRPN SKATGPNGEA 240
241 LTAEEAFKLA GISSGFFDLQ PKEGLALVNG TAVGSGMASM VLFETNVLSV LAEILSAVFA 300
301 EVMSGKPEFT DHLTHRLKHH PGQIEAAAIM EHILDGSSYM KLAQKLHEMD PLQKPKQDRY 360
361 ALRTSPQWLG PQIEVIRYAT KSIEREINSV NDNPLIDVSR NKAIHGGNFQ GTPIGVSMDN 420
421 TRLAIAAIGK LMFAQFSELV NDFYNNGLPS NLTASRNPSL DYGFKGAEIA MASYCSELQY 480
481 LANPVTSHVQ SAEQHNQDVN SLGLISSRKT SEAVDILKLM STTFLVAICQ AVDLRHLEEN 540
541 LRQTVKNTVS QVAKKVLTTG VNGELHPSRF CEKDLLKVVD REQVYTYADD PCSATYPLIQ 600
601 KLRQVIVDHA LINGESEKNA VTSIFHKIGA FEEELKAVLP KEVEAARAAY DNGTSAIPNR 660
661 IKECRSYPLY RFVREELGTE LLTGEKVTSP GEEFDKVFTA ICEGKIIDPM MECLNEWNGA 720
721 PIPIC
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1w27A |
| Description: | Phenylalanine ammonia-lyase (PAL) from Petroselinum crispum |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| histidine ammonia-lyase activity | 3.53226750625841 | bayes_pls_golite062009 |
| catalytic activity | 2.51282259572665 | bayes_pls_golite062009 |
| lyase activity | 2.31268471569846 | bayes_pls_golite062009 |
| carbon-nitrogen lyase activity | 2.2046475419807 | bayes_pls_golite062009 |
| amidine-lyase activity | 0.901614580251298 | bayes_pls_golite062009 |
| argininosuccinate lyase activity | 0.617974375213548 | bayes_pls_golite062009 |
| ammonia-lyase activity | 0.491229595527877 | bayes_pls_golite062009 |
| fumarate hydratase activity | 0.364320954362762 | bayes_pls_golite062009 |
