| Protein: | gi|24350457, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 699 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24350457, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
279.0 | [0..1] | [698..29] |
|
|
275.0 | [0..1] | [698..29] |
|
|
271.0 | [0..1] | [698..29] |
|
|
260.0 | [0..1] | [698..28] |
|
|
245.0 | [0..3] | [554..18] |
|
|
244.0 | [0..3] | [577..18] |
|
Region A: Residues: [1-418] |
1 11 21 31 41 51
| | | | | |
1 MVNPQAGVVV GYWHNWCGGA GYKGGVAPCV SLAQVNPQYN VVDISFMKVY GATGSIPTFK 60
61 LDPAVGLSEA QFIDQIGELN RQGRAVLIAL GGADAHIELR KGQEHDLANE IIRLVEKYGF 120
121 DGLDIDLEQA AVTAADNQIV IPAALRIVKD HYRKQQKNFL ITMAPEFPYL TTGGKYVPYI 180
181 NALEGYYDWI NPQFYNQGGD GIYIEGIGWI AQNNDSLKQE FIYHISDALV NGTNGFTKIP 240
241 HDKLVFGIPT NIDAAATGYV SDPNALFAAF EQLKNQGQPL RGLMTWSVNW DMGKNAAGQA 300
301 YNESFIKAYG PFIHGQDITP PEPENGKPIF SGLSNTRVKL GGTFNAMDGV SAYDEEDKDL 360
361 TQQIQVTGDV NTNQIGLYPL TYKVTDSDNN TTEQVRTVEV YNTKPELSGV SNTTIILA
|
| Detection Method: |  |
| Confidence: | 57.522879 |
| Match: | 1wawA |
| Description: | Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| chitinase activity | 4.63053093657993 | bayes_pls_golite062009 |
| catalytic activity | 0.904956784158091 | bayes_pls_golite062009 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 0.78623686340888 | bayes_pls_golite062009 |
| glucosidase activity | 0.58717079348538 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 0.54690583049799 | bayes_pls_golite062009 |
| amylase activity | 0.0914002140078796 | bayes_pls_golite062009 |
| hydrolase activity | 0.06868321459924 | bayes_pls_golite062009 |
| alpha-amylase activity | 0.0521244165288097 | bayes_pls_golite062009 |
| binding | 0.0211752443510049 | bayes_pls_golite062009 |
|
Region A: Residues: [419-635] |
1 11 21 31 41 51
| | | | | |
1 TPFDAMAGVS ATDAEDGNLT PNIRVEGEVD SNRVGQYQLT YSVSDSAGEQ TRAVRLVTVQ 60
61 EQGAVCENLW SASKIYLGGD TVNYAGKIWL AGWWTQGEQP DLAGEWGVWK SKGDSDCDSG 120
121 LPPVITPNFT VSGLASSYIL NQGQVSINFN VNTNQAMELT ANLTQEQRIL ASTTATINGN 180
181 GAMVLQAESL EAGAYQVVIS AKDKNLTQSY NVSLVQG
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1l0qA |
| Description: | Surface layer protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.263982339577965 | bayes_pls_golite062009 |
|
Region A: Residues: [636-699] |
1 11 21 31 41 51
| | | | | |
1 DDGSEPVEYP AYVAGNQYQA GNIVTNAGGV YQCRPWPNSG WCSGSAPYYA PGTGSAWQDA 60
61 WTKH
|
| Detection Method: | |
| Confidence: | 0.954 |
| Match: | 2d49A |
| Description: | No description for 2d49A was found. |
