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View Structure Prediction Details

Protein: gi|24374828, gi|...
Organism: Shewanella oneidensis MR-1
Length: 583 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24374828, gi|....

Description E-value Query
Range
Subject
Range
gi|78689604, gi|... - gi|78689604|ref|ZP_00854264.1| 5'-nucleotidase, putative [Shewanella sp. MR-7], gi|78511031|gb|EAP24...
439.0 [0..1] [583..1]
gi|78686216, gi|... - gi|78686216|ref|ZP_00850986.1| 5'-nucleotidase, putative [Shewanella sp. ANA-3], gi|78506008|gb|EAP1...
437.0 [0..1] [583..1]
gi|82406684, gi|... - gi|82495181|ref|ZP_00880758.1| 5'-nucleotidase, putative [Shewanella sp. MR-4], gi|82406684|gb|EAP47...
437.0 [0..1] [583..1]
gi|41055552, gi|... - gi|41055552|ref|NP_957226.1| 5' nucleotidase ecto [Danio rerio], gi|32766695|gb|AAH55243.1| 5'-nucle...
432.0 [0..2] [578..22]
gi|37200944, gi|... - gi|37676402|ref|NP_936798.1| putative 5'-nucleotidase [Vibrio vulnificus YJ016], gi|37200944|dbj|BAC...
430.0 [0..3] [573..43]
gi|27366688, gi|... - gi|27366688|ref|NP_762215.1| 5'-nucleotidase/2',3'-cyclic phosphodiesterase [Vibrio vulnificus CMCP6...
427.0 [0..3] [573..13]
gi|42406319 - gi|42406319|gb|AAH65937.1| 5'-nucleotidase, ecto (CD73) [Homo sapiens]
425.0 [0..2] [578..24]
gi|109071909 - gi|109071909|ref|XP_001086989.1| PREDICTED: 5' nucleotidase, ecto isoform 3 [Macaca mulatta]
425.0 [0..2] [578..24]

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Predicted Domain #1
Region A:
Residues: [1-583]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQRYSLSLA HINDTHSNFE PSRVHFSLNL GLKSFDITSH SGGYARLGYH ISKAREQADQ  60
   61 SNTPFLFLHG GDSFQGTLYF SHFKGKANAH LLNLLAPDAM VIGNHDIDEG NARLAEFAKQ 120
  121 IDFPLLAGNM DLSQEDIRKP GNLRTVANIL AYDEKTQLAS YLEKPFYDKK LAVIGITLDQ 180
  181 MKDIARPDPD THFVDAIATT ARTVEHLHAK GIKHIIVLSH LGLDQDKRLA EQVDGISLIV 240
  241 GGHTHTLQGD FTALGLSHLP YGEMVNGTPI VHAGKYAETL GLAEVEFDAA GRTIRLSGGN 300
  301 YFMLDKQFIL SSSEQVDDTD YQAVRQRFDA HPFILGDEAD EDIHDIIHDI YRPAIAEMEN 360
  361 KILALVPKNL VHTRLPSKTL PHGSEIAPWV SRSMFQEARI EDPRIHFALH NAGGVRQSVA 420
  421 QGQLTLADVL GQLLPFELPL VKYEIQGEYL YQALESAINA ATNNSVRGTG AGSFPYTYGL 480
  481 RYYYDGRRPL GERLFKLEMM PQDGQSLWYP VKQDALYVGV STSYTAAGKE GYHPLLQARW 540
  541 QESIDTLTLP QAFIRFLNRA PNPNFADLLS PHVHYTSHLK RSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 108.0
Match: 1ushA
Description: 5'-NUCLEOTIDASE FROM E. COLI
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 6.90309911517124 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.76617976580319 bayes_pls_golite062009
phosphatase activity 6.28072946025083 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.93537144836081 bayes_pls_golite062009
protein serine/threonine phosphatase activity 5.11265802430394 bayes_pls_golite062009
hydrolase activity 2.06280293513737 bayes_pls_golite062009
catalytic activity 1.39852585255405 bayes_pls_golite062009
binding 0.607014751804583 bayes_pls_golite062009
calcium-dependent protein serine/threonine phosphatase activity 0.598330833036731 bayes_pls_golite062009
protein kinase activity 0.55395641922978 bayes_pls_golite062009
signal transducer activity 0.541715460439478 bayes_pls_golite062009
molecular transducer activity 0.541715460439478 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.395006104431866 bayes_pls_golite062009
kinase activity 0.366390322110727 bayes_pls_golite062009
protein binding 0.184079020957384 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.39246790349923E-4 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle