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View Structure Prediction Details

Protein: gi|24374593, gi|...
Organism: Shewanella oneidensis MR-1
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24374593, gi|....

Description E-value Query
Range
Subject
Range
gi|186465829, gi... - gi|23126914|ref|ZP_00108795.1| COG3321: Polyketide synthase modules and related proteins [Nostoc pun...
530.0 [0..2] [401..41]
gi|17131773, gi|... - gi|17230172|ref|NP_486720.1| polyketide synthase [Nostoc sp. PCC 7120], gi|17131773|dbj|BAB74379.1| ...
gi|25535295 - pir||AI2140 polyketide synthase [imported] - Nostoc sp. (strain PCC 7120)
523.0 [0..2] [403..28]
gi|53765235, gi|... - gi|75910938|ref|YP_325234.1| Beta-ketoacyl synthase [Anabaena variabilis ATCC 29413], gi|75704663|gb...
523.0 [0..1] [402..1]
gi|67857338, gi|... - gi|67921221|ref|ZP_00514740.1| Beta-ketoacyl synthase:Acyl transferase region [Crocosphaera watsonii...
515.0 [0..2] [401..34]

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Predicted Domain #1
Region A:
Residues: [1-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRVVITGMG VVSSIGNNKQ EVTESLKAGR SGITHSAQFE EMQLRSHVWG NIKLDPSELI  60
   61 DRKALRFMGD AAAYAYIAMQ EAIKDAQLTE EQYSNPRVGL IVGTGGASSS NQVQAADILR 120
  121 EKGVKRVGPY IVPRIMASTA SACLATPFKI KGMNYSISSA CATSAHCIGH AVELIQMGKQ 180
  181 DMVFAGGAEE LDWTLTMGFD AMGALSTKYN ATPDKASRTY DADRDGFVIS GGGGILIVEE 240
  241 LEHALARGAK IYAEVIGYGA SSDGYDMVAP SGEGAVRCMR LALADVDTPI DYINTHGTST 300
  301 PVGDVRELEA LREVFKDKCP PVASTKSMTG HALGAAGVHE AIYSLIMMEN SFIAPSINID 360
  361 NLDEAAKDMP IVREYRDAEL NTVMSNSFGF GGTNATLVMR KYK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 1dd8A
Description: Beta-ketoacyl-ACP synthase I
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring acyl groups 4.09204107606289 bayes_pls_golite062009
fatty acid synthase activity 3.79121338118181 bayes_pls_golite062009
3-oxoacyl-[acyl-carrier-protein] synthase activity 3.71249191203055 bayes_pls_golite062009
C-acyltransferase activity 3.27532895419051 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 3.14957464437124 bayes_pls_golite062009
acyltransferase activity 3.06879684191353 bayes_pls_golite062009
transferase activity 2.15834234036431 bayes_pls_golite062009
catalytic activity 2.14505178497871 bayes_pls_golite062009
acetyl-CoA C-acyltransferase activity 2.06897329929762 bayes_pls_golite062009
acetyl-CoA C-acetyltransferase activity 1.50839304016514 bayes_pls_golite062009
C-acetyltransferase activity 1.19264084089277 bayes_pls_golite062009
holo-[acyl-carrier-protein] synthase activity 0.800737755066121 bayes_pls_golite062009
fatty-acyl-CoA synthase activity 0.696028474623411 bayes_pls_golite062009
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 0.5334204157422 bayes_pls_golite062009
phosphotransferase activity, for other substituted phosphate groups 0.392307675469965 bayes_pls_golite062009
acetyltransferase activity 0.254850076259913 bayes_pls_golite062009

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