| Protein: | gi|24348548, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 342 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24348548, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
422.0 | [0..5] | [342..20] |
|
|
420.0 | [0..1] | [342..1] |
|
|
417.0 | [0..2] | [342..3] |
|
|
417.0 | [0..2] | [342..3] |
|
|
412.0 | [0..1] | [342..1] |
|
|
407.0 | [0..1] | [342..1] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MATSYHLSDI LQQHLAHYQQ QHKLTEQQAL VCQHIQQCRT QTLGMQHWRC DTCQYEQQVC 60
61 CSCGDRHCPR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [71-342] |
1 11 21 31 41 51
| | | | | |
1 CQGRQTQAWI ATQQAQVLPC RYFHLVFTLP HELNILAHYA AKPLYSALFE SVWQTLAQFG 60
61 MKRKHLQGQL GCTMVLHTWG QTLSQHIHLH CLIPGGVVTS AGDWHGVKTD YLFPVKALST 120
121 VYRAKLLRAL RQHELAIPAA ETLMAKPWCV YSKACLSRAE TVVEYLGRYT RKGMLHESRI 180
181 AEVTADHVRF NYKDYRDGQQ HKQMWLSCDE FIRRYLLHVL PKGLMRVRHF GFLANACRRK 240
241 KLALILRQLR KPQVVLASPL VKKDCLWSCP QC
|
| Detection Method: | |
| Confidence: | 1.9 |
| Match: | 1omhA |
| Description: | Conjugative Relaxase TrwC in complex with OriT Dna. Metal-free structure. |
Matching Structure (courtesy of the PDB): |
|
