| Protein: | gi|24373834, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 624 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24373834, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
468.0 | [0..38] | [622..1160] |
|
|
456.0 | [0..11] | [618..849] |
|
|
455.0 | [0..16] | [622..1010] |
|
|
448.0 | [0..14] | [621..864] |
|
|
437.0 | [0..15] | [584..660] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MNTKRLPLAG AILASLLLGA CNGDDGVNGE QGDNGLNSLV KVTALAIGDT NCPAGGQRID 60
61 TGLDANRNGQ LEDAEIITAQ
|
| Detection Method: |  |
| Confidence: | 24.39794 |
| Match: | 2aq5A |
| Description: | Crystal Structure of Murine Coronin-1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [81-148] |
1 11 21 31 41 51
| | | | | |
1 TQFICQPQSA GVKAELIGRH QTGIYGLSAA EIVEYHSDSK RIFVVNAISG KVDMLDASLL 60
61 ANATKASE
|
| Detection Method: | |
| Confidence: | 51.0 |
| Match: | 2ovpB |
| Description: | No description for 2ovpB was found. |
|
Region A: Residues: [149-410] |
1 11 21 31 41 51
| | | | | |
1 PLALNNLDKL GELDVAKDVG LSFMGSVNSV SISGNLLAAA IERGDAAGNK TQSNGFVAFY 60
61 QLNGIEAPLF ISAVEVGALP DNVVFSHDGK TVLVANEGEP NQDYSIDPEG SVAIIAIVDS 120
121 KPSVTATLVQ FTEFNQGNAR NKEITHDIKI NGPIASVAQD LEPEYISISP DNSHAFVSLQ 180
181 ENNAIAVIDI TKAKVDKILP LGLKDYGLGV NIIDASDKDD LVNLQAYAGV YGMYQPDTVA 240
241 SYRWNNTDFI VTANEGDSRD YA
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 2i3sA |
| Description: | No description for 2i3sA was found. |
|
Region A: Residues: [411-532] |
1 11 21 31 41 51
| | | | | |
1 GFSEEARAAD LTLDPNHPQF AAAKDKTQLA RLKVTKSMGN DDNDADHDKI VSFGARSFSI 60
61 WTTGGQLVFD SGSDFERITA ALLGNNFNNN NEENKGDSRS DDKGPEPEAL TLGKIGQKRY 120
121 AF
|
| Detection Method: | |
| Confidence: | 37.045757 |
| Match: | 1p22A |
| Description: | F-box/WD-repeat protein 1 (beta-TRCP1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [533-624] |
1 11 21 31 41 51
| | | | | |
1 IGLERTSGFM IYDVTNPFDV HFVDYVVNRD FDADFVIDTS TGKVKGDASL AGDLGPEGMK 60
61 FVSADKSPNR QPLLIIGNEV SGTTSVYQIK VQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.801 | b.1.2 | Fibronectin type III |
