| Protein: | gi|24372945, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 671 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24372945, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
534.0 | [0..1] | [671..1] |
|
|
531.0 | [0..1] | [671..1] |
|
|
529.0 | [0..1] | [671..1] |
|
|
505.0 | [0..1] | [671..1] |
|
|
501.0 | [0..1] | [670..1] |
|
|
499.0 | [0..1] | [657..1] |
|
|
496.0 | [0..1] | [671..1] |
|
|
488.0 | [0..1] | [646..1] |
|
|
485.0 | [0..1] | [646..1] |
|
|
482.0 | [0..1] | [646..1] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MQKPQPLNHT REQITQLDND LLSLLAERRR LSLEVARSKE VDVRPIRDTQ REKELLARLV 60
61 TAGREKGLDA HYVISLYQSI IEDSVLNQQA YLHGRANPET Q
|
| Detection Method: |  |
| Confidence: | 20.69897 |
| Match: | 1ecmA |
| Description: | Chorismate mutase domain of P-protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| chorismate mutase activity | 3.78733095924257 | bayes_pls_golite062009 |
| catalytic activity | 1.09506175640279 | bayes_pls_golite062009 |
|
Region A: Residues: [102-338] |
1 11 21 31 41 51
| | | | | |
1 KQQYCIAYLG ARGSYSYLAA SRYCQRRQVE MLDLGCQSFD EIVQAVESGH ADYGFLPIEN 60
61 TSSGSINEVY DVLQHTSLSI VGETTIEVSH CLLGKPGSKL SEIKTVYAHP QPISQCSRYL 120
121 SQHKALRLEY CSSSAEAMEK VNQSPDNSAA AIGSAEGGAL YQLESIESGL ANQKINQSRF 180
181 IVVARKAVAV PEQLPAKTTL IMATGQKAGA LVEALLVLKA HQLNMSKLES RPIPGTP
|
| Detection Method: | |
| Confidence: | 78.09691 |
| Match: | 2qmxA |
| Description: | No description for 2qmxA was found. |
|
Region A: Residues: [339-671] |
1 11 21 31 41 51
| | | | | |
1 WEEMFYLDID ANISSEAMQQ GLKQLERITR FIKVLGCYPC ETVTPTQLSN SQLLIEPNTS 60
61 KAEVLSEVST KQSPYRYSKA YKAQASEIHC GPFTIGAGHI GAIAKVTLSK SLLHLESSHA 120
121 AAHIALSAFE HKIKQLKEVG FQAVILEGCQ QLASKEAIIP KLRQTLHQYD LLCVIAIEQA 180
181 ADMPLATEHA DMLFLTGKQM FNQALLTQAG TLPIPLFLER NDMASYEEFL AATETILSQG 240
241 NQQLILCDSG IRTYNNANLP TLDLASLILI KANSHLPIVI NPCYAINEDA LVLQTQGIKQ 300
301 LKADGIVLNY ALEEDKAHHS LALMGEVVRE LYR
|
| Detection Method: | |
| Confidence: | 74.522879 |
| Match: | 1vr6A |
| Description: | Crystal structure of Phospho-2-dehydro-3-deoxyheptonate aldolase (DAHP synthase) (TM0343) from Thermotoga Maritima at 1.92 A resolution |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 3-deoxy-7-phosphoheptulonate synthase activity | 2.72022882819661 | bayes_pls_golite062009 |
| catalytic activity | 2.67031204377352 | bayes_pls_golite062009 |
| lyase activity | 0.740424046054758 | bayes_pls_golite062009 |
| transferase activity, transferring aldehyde or ketonic groups | 0.719960432098845 | bayes_pls_golite062009 |
| oxo-acid-lyase activity | 0.606352769346285 | bayes_pls_golite062009 |
| transferase activity | 0.464721888799972 | bayes_pls_golite062009 |
| carbon-carbon lyase activity | 0.36754360512349 | bayes_pls_golite062009 |
