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View Structure Prediction Details

Protein: gi|24372907, gi|...
Organism: Shewanella oneidensis MR-1
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24372907, gi|....

Description E-value Query
Range
Subject
Range
gi|73971795 - gi|73971795|ref|XP_531993.2| PREDICTED: similar to Atrial natriuretic peptide receptor B precursor (...
263.0 [0..69] [334..725]
gi|113678661, gi... - gi|94732803|emb|CAK10994.1| novel protein similar to vertebrate natriuretic peptide receptor A/guany...
263.0 [0..92] [334..818]
gi|74196566 - gi|74196566|dbj|BAE34402.1| unnamed protein product [Mus musculus]
263.0 [0..57] [334..361]
gi|112983652, gi... - gi|12964646|dbj|BAB32672.1| receptor type guanylyl cyclase [Bombyx mori], gi|112983652|ref|NP_001036...
262.0 [0..92] [334..828]
gi|114624439 - gi|114624439|ref|XP_001168167.1| PREDICTED: natriuretic peptide receptor B isoform 1 [Pan troglodyte...
261.0 [0..57] [334..737]
gi|109111044 - gi|109111044|ref|XP_001085108.1| PREDICTED: natriuretic peptide receptor B isoform 1 [Macaca mulatta...
261.0 [0..57] [334..737]
gi|64653354 - gi|64653354|gb|AAH96341.1| NPR2 protein [Homo sapiens]
261.0 [0..69] [334..749]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAFVFFRYA QSPELPQWAV GSADLATLAI YMGIIFGSLH WMSNLIADFS AINRLPYIFS  60
   61 VIFKGLFLLL GATTLAYMTQ FLNMWAIENH MSTLRQMLTA HILYSPSFQA LIVYLVVVRV 120
  121 SLAFVEQMGL LVGPRILLNI GLGKYH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [147-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPRYEQRLFL YLDMVASTTH AESLGDYRFS RLIQDSFSLL SDTVSNNEAE IYRYMGDAVL  60
   61 IHWPLEEGVV HDRCMNIYFE FSQQLNWQRR YFEEHYGFVP KFKAAAHCGQ VVAAVVGVQK 120
  121 QEISFFSDVL NTLARLQDQC NPMGQRMLIS GALAGRLDNP DSAYRLTNLG PIKLKGKQHS 180
  181 IEVFGVSPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.39794
Match: 1yk9A
Description: Crystal structure of a mutant form of the mycobacterial adenylyl cyclase Rv1625c
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle