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View Structure Prediction Details

Protein: gi|24372907, gi|...
Organism: Shewanella oneidensis MR-1
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24372907, gi|....

Description E-value Query
Range
Subject
Range
gi|73971795 - gi|73971795|ref|XP_531993.2| PREDICTED: similar to Atrial natriuretic peptide receptor B precursor (...
263.0 [0..69] [334..725]
gi|113678661, gi... - gi|94732803|emb|CAK10994.1| novel protein similar to vertebrate natriuretic peptide receptor A/guany...
263.0 [0..92] [334..818]
gi|74196566 - gi|74196566|dbj|BAE34402.1| unnamed protein product [Mus musculus]
263.0 [0..57] [334..361]
gi|112983652, gi... - gi|12964646|dbj|BAB32672.1| receptor type guanylyl cyclase [Bombyx mori], gi|112983652|ref|NP_001036...
262.0 [0..92] [334..828]
gi|114624439 - gi|114624439|ref|XP_001168167.1| PREDICTED: natriuretic peptide receptor B isoform 1 [Pan troglodyte...
261.0 [0..57] [334..737]
gi|109111044 - gi|109111044|ref|XP_001085108.1| PREDICTED: natriuretic peptide receptor B isoform 1 [Macaca mulatta...
261.0 [0..57] [334..737]
gi|64653354 - gi|64653354|gb|AAH96341.1| NPR2 protein [Homo sapiens]
261.0 [0..69] [334..749]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAFVFFRYA QSPELPQWAV GSADLATLAI YMGIIFGSLH WMSNLIADFS AINRLPYIFS  60
   61 VIFKGLFLLL GATTLAYMTQ FLNMWAIENH MSTLRQMLTA HILYSPSFQA LIVYLVVVRV 120
  121 SLAFVEQMGL LVGPRILLNI GLGKYH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [147-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPRYEQRLFL YLDMVASTTH AESLGDYRFS RLIQDSFSLL SDTVSNNEAE IYRYMGDAVL  60
   61 IHWPLEEGVV HDRCMNIYFE FSQQLNWQRR YFEEHYGFVP KFKAAAHCGQ VVAAVVGVQK 120
  121 QEISFFSDVL NTLARLQDQC NPMGQRMLIS GALAGRLDNP DSAYRLTNLG PIKLKGKQHS 180
  181 IEVFGVSPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.39794
Match: 1yk9A
Description: Crystal structure of a mutant form of the mycobacterial adenylyl cyclase Rv1625c
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle