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View Structure Prediction Details

Protein: gi|24372696, gi|...
Organism: Shewanella oneidensis MR-1
Length: 155 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24372696, gi|....

Description E-value Query
Range
Subject
Range
gi|114637918 - gi|114637918|ref|XP_001140124.1| PREDICTED: similar to Ferritin heavy chain (Ferritin H subunit) (Pr...
169.0 [0..3] [154..120]
gi|47125326 - gi|47125326|gb|AAH70494.1| FTH1 protein [Homo sapiens]
169.0 [0..3] [154..62]
gi|83404987 - gi|83404987|gb|AAI11079.1| Fth1 protein [Rattus norvegicus]
165.0 [0..3] [154..63]
gi|109078314 - gi|109078314|ref|XP_001088733.1| PREDICTED: similar to mitochondrial ferritin [Macaca mulatta]
160.0 [0..3] [153..73]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGDKDVIDA LNRLLTGELS AMDQYFVHAH MYEDWGLNEL YERIAHESDD EKGHAAKLVQ  60
   61 RILFLEGVPN VAAREALNIG SNVEEMLRND LAYEYKVADD LRKVIALCEQ KKDYQTREIL 120
  121 EVLLDDTESD HMYWLEKQLG LIDRIGLANY LQTKM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 2fkzA
Description: No description for 2fkzA was found.

Predicted functions:

Term Confidence Notes
ferric iron binding 5.55100638826026 bayes_pls_golite062009
iron ion binding 3.10225782829614 bayes_pls_golite062009
cation binding 1.66873432300081 bayes_pls_golite062009
metal ion binding 1.66873432300081 bayes_pls_golite062009
ion binding 1.66140448750278 bayes_pls_golite062009
binding 1.54910183644416 bayes_pls_golite062009
transition metal ion binding 1.51474534368635 bayes_pls_golite062009
protein binding 0.20531413038279 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle