| Protein: | YKR18_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 725 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKR18_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..725] | [1..725] |
|
|
0.0 | [123..718] | [114..623] |
|
|
0.0 | [119..725] | [45..561] |
|
|
0.0 | [118..723] | [54..586] |
|
|
5.0E-99 | [323..707] | [1..346] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MFKVFGFGAK EEIPELSQEE KTKAILKQAH DFEQALRAMD YVLDDNADEG LALLDESDAK 60
61 EASDQTINAL ARGVIEFLEA TLGFEAEEMK KASATLAKAE ALSLKSRERA QKIGLKSSSL 120
121 YPPGTVYAVT YTESCLLHAL LMIFSESMME AAKAILKLRK SYYMLQEILE TIKAANKAKK 180
181 LKI
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.550 | 0.206 | cytoplasm | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.379 | 0.001 | nucleus | c.92.2 | "Helical backbone" metal receptor |
| View | Download | 0.399 | 0.000 | nucleus | a.19.1 | Fertilization protein |
| View | Download | 0.430 | 0.000 | nucleus | a.63.1 | Apolipophorin-III |
| View | Download | 0.627 | 0.000 | nucleus | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.374 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.358 | N/A | N/A | a.47.1 | STAT |
| View | Download | 0.300 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.287 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.241 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.232 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.225 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.222 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.220 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.215 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.212 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.211 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.209 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.206 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.205 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.204 | N/A | N/A | a.149.1 | RNase III endonuclease catalytic domain |
| View | Download | 0.204 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.201 | N/A | N/A | a.123.1 | Nuclear receptor ligand-binding domain |
| View | Download | 0.201 | N/A | N/A | b.40.4 | Nucleic acid-binding proteins |
|
Region A: Residues: [184-363] |
1 11 21 31 41 51
| | | | | |
1 TSGSEDKEST PATFITGGDA FNSVDIPYEL TPEEQKDKDL LQFAEQIHSM RTERLSGAHI 60
61 GNSPAINRLR GELGLQAMED LPEEEITDHK VLSDDIDLSQ ATIDEFVHSG VNLCFGILQV 120
121 VISLLPPAIG AVLSVVGFRG SREEGLRLVW KATKQRNVHG CIGLLALMFY YDGPFQFTDD 180
181
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [364-456] |
1 11 21 31 41 51
| | | | | |
1 DFDIPAAVKD SSNSEDSEDE EMDGPTLLHP GKILEDALLQ SRALFPNSAL WLLNEARMLS 60
61 GKGRLEEAVA LMDSIDVSKI RMRQVKSLMI FDR
|
| Detection Method: | |
| Confidence: | 10.57 |
| Match: | 1hz4A |
| Description: | Transcription factor MalT domain III |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [457-576] |
1 11 21 31 41 51
| | | | | |
1 AITLIHLHQY DRAAEDILSL LDISDWSHAF YTYFAGCCYL ENWRMCEMGL MKSDKKDEYQ 60
61 KKAEELIFTS VNLLGKKTFK SKNLPLDRFI LRKVEQFKAK KEELGVENPL DGIATSPVHE 120
121
|
| Detection Method: | |
| Confidence: | 10.57 |
| Match: | 1hz4A |
| Description: | Transcription factor MalT domain III |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [577-725] |
1 11 21 31 41 51
| | | | | |
1 IAYFYNGYNR MSEEHLELTK KMLTEYRNPA IEALDSDQEL IKDLLVSLTL RRLGHIQEGC 60
61 DILDEKVLPK FFSIQNGKVK YIKKTEDPWA YPTALYERAL FTWKLEGMDG LPESKEWLLR 120
121 AQGYADDYEL STRVGMKIKA AIDRVDHSL
|
| Detection Method: | |
| Confidence: | 10.57 |
| Match: | 1hz4A |
| Description: | Transcription factor MalT domain III |
| Matching Structure (courtesy of the PDB): |
|
