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View Structure Prediction Details

Protein: YKE4_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKE4_YEAST.

Description E-value Query
Range
Subject
Range
YKE4_YEAST - Zinc transporter YKE4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKE4 PE=1 SV=1
YKE4 - Zinc transporter; localizes to the ER; null mutant is sensitive to calcofluor white, leads to zinc a...
4.0E-60 [1..346] [1..346]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
1.0E-49 [46..343] [30..347]
gi|9716481, gi|4... - gi|9716481|gb|AAF97509.1|AF246266_1 iron-regulated transporter 1 [Lycopersicon esculentum], gi|48367...
2.0E-47 [46..343] [31..349]
ZIP8_ARATH - Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1
2.0E-46 [46..343] [34..346]
gi|16549712, gi|... - gi|22749433|ref|NP_689938.1| solute carrier family 39 (zinc transporter), member 12 [Homo sapiens], ...
1.0E-44 [60..332] [361..634]
gi|16304676 - gi|16304676|emb|CAC86382.1| putative Fe(II) transporter [Thlaspi caerulescens]
2.0E-44 [47..343] [36..345]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASHICSYL LSIAPLVVSH GVHHNRDHGH EANHESKQSF LILKQESIFY SLVCFLQNHL  60
   61 FVLGPRYNAI VAILIIQLMP CLFVLFVPGL RKNDRASLTL SLLVSFSLGT LLGDILLHVI 120
  121 PESLSGVTDV TMVGGAIFLG FISFLTLDKT MRILSGTSND DGSIHSHSH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHTPQQTAEK KAGFNMSAYL NVISGIAHHI TDGIALATSF YSSTQVGIMT SIAVTFHEIP  60
   61 HELGDFAILL SSGFTFPQAI RAQAVTAFGA VVGTSIGCWM NEIGNNSHKA TSSSANASEL 120
  121 MLPFTAGGLI YIATTSVVPQ ILHSSAPDSK LREFKKWALQ LVFIFVGFAV MALMDEH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.19382
Match: PF02535
Description: ZIP Zinc transporter

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle