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View Structure Prediction Details

Protein: SLM2_YEAST
Organism: Saccharomyces cerevisiae S288c
Length: 656 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLM2_YEAST.

Description E-value Query
Range
Subject
Range
SLM1_YEAST - Phosphatidylinositol 4,5-bisphosphate-binding protein SLM1 OS=Saccharomyces cerevisiae (strain ATCC ...
gi|190406316 - gi|190406316|gb|EDV09583.1| hypothetical protein SCRG_05277 [Saccharomyces cerevisiae RM11-1a]
gi|207344373 - gi|207344373|gb|EDZ71539.1| YIL105Cp-like protein [Saccharomyces cerevisiae AWRI1631]
SLM1 - Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p; acts downstream of Mss4p in ...
563.0 [0..14] [645..25]
gi|49644390 - gi|49644390|emb|CAG97962.1| KLLA0F03839p [Kluyveromyces lactis]
gi|49644390, gi|... - gi|50310469|ref|XP_455254.1| unnamed protein product [Kluyveromyces lactis], gi|49644390|emb|CAG9796...
357.0 [0..1] [625..1]
gi|44982377 - gi|44982377|gb|AAS51686.1| ADL234Cp [Ashbya gossypii ATCC 10895]
gi|44982377, gi|... - gi|45187639|ref|NP_983862.1| ADL234Cp [Ashbya gossypii ATCC 10895], gi|44982377|gb|AAS51686.1| ADL23...
350.0 [0..137] [571..219]
SLM1_SCHPO - Cytoskeletal signaling protein slm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=slm1 P...
SPAC637.13c - cytoskeletal signaling protein
331.0 [0..166] [649..36]
gi|49525794, gi|... - gi|50288115|ref|XP_446486.1| unnamed protein product [Candida glabrata], gi|49525794|emb|CAG59413.1|...
gi|49525794 - gi|49525794|emb|CAG59413.1| unnamed protein product [Candida glabrata]
298.0 [0..119] [634..188]
gi|108995611 - gi|108995611|ref|XP_001093292.1| PREDICTED: similar to centaurin, beta 5 [Macaca mulatta]
284.0 [0..189] [615..115]
ACAP3 - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
276.0 [0..189] [615..19]
gi|114591214 - gi|114591214|ref|XP_516962.2| PREDICTED: centaurin, beta 2 [Pan troglodytes]
276.0 [0..189] [612..207]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYQRNSARA SLDLRSQYQQ LEGRMRSEHF NPAYQQQQQK GQNIPLSLPS SLAQRNPIPY  60
   61 PIDAVTSDPT IPAQLNVYDH DRQNSIVDAA AGTNTTHSLN SNNIPSSQNN NINNNNINNV 120
  121 G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-289]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFTDPSMLTL PKMSLHSHQK QYDSNQNDPR SPLAILIPTS AQPTDVLSAR FSAWRNVIRA  60
   61 ILVYLSETAS IQDEIVRQQL RLSHAVQFPF FSIENQYQPV SNEDKSMQKF FLPLGSGSVQ 120
  121 DLPTMLTKYH DNLASLASKS SKELTSEIIP RLEDLRRDLL VKIKEIKA

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 8.2
Match:
Description: No description for 1i84S was found.

Predicted Domain #3
Region A:
Residues: [290-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQSDFKNSCN KELQQTKHLM KLFNESLKEC KLGTPKSDPF LIKLQLEKQI KRQLVEENYL  60
   61 HEAFDNLQNS GAQLESVIVM EIQNGLTSYA RILGKEAQVV FDSVISKLDS TILNK

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 8.2
Match:
Description: No description for 1i84S was found.

Predicted Domain #4
Region A:
Residues: [405-595]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTNLEWDSFI LRNISNFVPP NLPMRRFKEI SYSNQNDPFT FEVKSGFLEK RSKFLKSYSR  60
   61 GFYVLTPSFL HEFKTPDKHK FSTPLMSIPL VECTVTEHSK KTKSNSEQGK NKFILRTNSN 120
  121 GLIHRGHNWV FKVDSYDDMI EWFGNIKALS SLPNYDDKCK YVSKVAKLSK EKAKSNENTT 180
  181 ESVTPQVTNE Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.594777
Match: 1fhwA
Description: Grp1
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [596-656]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HTRYDDVSSS NFPLNSIPKL DNLTITNTTS SIPETNDSQI QNRVPEFYIE NVDSPRKSNQ  60
   61 L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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