| Protein: | PAL1_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 499 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAL1_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..499] | [1..499] |
|
|
1.0E-78 | [53..458] | [7..362] |
|
|
9.0E-76 | [54..326] | [1297..1566] |
|
|
1.0E-75 | [54..326] | [1302..1571] |
|
|
5.0E-49 | [94..244] | [244..398] |
|
|
4.0E-28 | [94..228] | [244..383] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MENRNSSTSS RPFSVNNPFR NATVDSSINQ YKNDSQFQEW AKNQSRTNSF DMPQLNTRTS 60
61 SQLSFPNIPE DEPQRNA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.257 | a.77.1 | DEATH domain |
| View | Download | 0.292 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.236 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.480 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.229 | a.65.1 | Annexin |
| View | Download | 0.211 | a.134.1 | Fungal elicitin |
| View | Download | 0.211 | a.65.1 | Annexin |
| View | Download | 0.210 | d.42.1 | POZ domain |
|
Region A: Residues: [78-199] |
1 11 21 31 41 51
| | | | | |
1 DQQGAFYSGL ESFSSGSLSP PSRPLSSKNP FLDDVSSATD FRRSPPPVSR NKNHPTAKEE 60
61 KEQLRQRYLE ESDVSTVGNT RENTDLPPSY EEITSTNGSR RAYPKEKVSR PSSHREHSNS 120
121 GT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [200-406] |
1 11 21 31 41 51
| | | | | |
1 YISRRSSSHH HREASSSSTP SKKGKRKSKV IVPKNVDTID KLDVTGLFGG SFHHDGPFDA 60
61 VTPHRNKNNK AAPVLAFPVD GPNSTIGGAS TKKSALDEVF GRDDTDDSDI YQYSSQTLRR 120
121 GGDTQDAIKA NVGNVQQMDA KNKTELVHGP VTAGLGSSTF LDGAPASSAA IRNDIKAHSY 180
181 HNRNGGLQRN KSLSQRLGLG GSGDSNA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.398 | N/A | N/A | g.52.1 | Inhibitor of apoptosis (IAP) repeat |
| View | Download | 0.323 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.311 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.288 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.225 | N/A | N/A | c.23.3 | Hypothetical protein MTH538 |
|
Region A: Residues: [407-499] |
1 11 21 31 41 51
| | | | | |
1 PMTGVRRNLS LSRDNYDVGH SNEGVRRSKT VNSPNRTHKS NYTTDFDGQD DHNEDEEDVY 60
61 LGVRYNEPNM KKKSTGSKLL SRVKSLKVGR KSQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.288 | a.3.1 | Cytochrome c |
| View | Download | 0.311 | a.77.1 | DEATH domain |
| View | Download | 0.398 | g.52.1 | Inhibitor of apoptosis (IAP) repeat |
| View | Download | 0.323 | a.7.8 | GAT domain |
| View | Download | 0.225 | c.23.3 | Hypothetical protein MTH538 |
