| Protein: | MED17_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 687 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MED17_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
1221.0 | [0..1] | [687..1] |
|
|
569.0 | [0..3] | [682..5] |
|
|
481.0 | [0..5] | [682..2] |
|
|
441.0 | [0..14] | [682..10] |
|
|
253.0 | [0..99] | [314..34] |
|
|
130.0 | [0..87] | [461..10] |
|
|
130.0 | [0..149] | [564..27] |
|
|
123.0 | [0..191] | [586..71] |
|
|
112.0 | [0..178] | [576..59] |
|
Region A: Residues: [1-342] |
1 11 21 31 41 51
| | | | | |
1 MTTEDPDSNH LSSETGIKLA LDPNLITLAL SSNPNSSLHS PTSDEPVPES AGKADTSIRL 60
61 EGDELENKTK KDNDKNLKFL KNKDSLVSNP HEIYGSMPLE QLIPIILRQR GPGFKFVDLN 120
121 EKELQNEIKQ LGSDSSDGHN SEKKDTDGAD ENVQIGEDFM EVDYEDKDNP VDSRNETDHK 180
181 TNENGETDDN IETVMTQEQF VKRRRDMLEH INLAMNESSL ALEFVSLLLS SVKESTGMSS 240
241 MSPFLRKVVK PSSLNSDKIP YVAPTKKEYI ELDILNKGWK LQSLNESKDL LRASFNKLSS 300
301 ILQNEHDYWN KIMQSISNKD VIFKIRDRTS GQKLLAIKYG YE
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [343-415] |
1 11 21 31 41 51
| | | | | |
1 DSGSTYKHDR GIANIRNNIE SQNLDLIPHS SSVFKGTDFV HSVKKFLRVR IFTKIESEDD 60
61 YILSGESVMD RDS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.642 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.607 | d.40.1 | CI-2 family of serine protease inhibitors |
| View | Download | 0.607 | d.40.1 | CI-2 family of serine protease inhibitors |
| View | Download | 0.561 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.530 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.525 | d.68.5 | C-terminal domain of ProRS |
| View | Download | 0.525 | d.68.5 | C-terminal domain of ProRS |
| View | Download | 0.508 | a.60.14 | Description not found. |
| View | Download | 0.496 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [416-687] |
1 11 21 31 41 51
| | | | | |
1 ESEEAETKDI RKQIQLLKKI IFEKELMYQI KKECALLISY GVSIENENKV IIELPNEKFE 60
61 IELLSLDDDS IVNHEQDLPK INDKRANLML VMLRLLLVVI FKKTLRSRIS SPHGLINLNV 120
121 DDDILIIRPI LGKVRFANYK LLLKKIIKDY VLDIVPGSSI TETEVEREQP QENKNIDDEN 180
181 ITKLNKEIRA FDKLLNIPRR ELKINLPLTE HKSPNLSLML ESPNYCNALI HIKFSAGTEA 240
241 NAVSFDTTFS DFKEVEDFLH FIVAEYIQQK KV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
