| Protein: | IMB5_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 1004 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IMB5_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [3..999] | [25..1036] |
|
|
0.0 | [3..999] | [25..1036] |
|
|
0.0 | [1..1004] | [1..1004] |
|
|
0.0 | [3..846] | [11..859] |
|
Region A: Residues: [1-704] |
1 11 21 31 41 51
| | | | | |
1 MDINELIIGA QSADKHTREV AETQLLQWCD SDASQVFKAL ANVALQHEAS LESRQFALLS 60
61 LRKLITMYWS PGFESYRSTS NVEIDVKDFI REVLLKLCLN DNENTKIKNG ASYCIVQISA 120
121 VDFPDQWPQL LTVIYDAISH QHSLNAMSLL NEIYDDVVSE EMFFEGGIGL ATMEIVFKVL 180
181 NTETSTLIAK IAALKLLKAC LLQMSSHNEY DEASRKSFVS QCLATSLQIL GQLLTLNFGN 240
241 VDVISQLKFK SIIYENLVFI KNDFSRKHFS SELQKQFKIM AIQDLENVTH INANVETTES 300
301 EPLLETVHDC SIYIVEFLTS VCTLQFSVEE MNKIITSLTI LCQLSSETRE IWTSDFNTFV 360
361 SKETGLAASY NVRDQANEFF TSLPNPQLSL IFKVVSNDIE HSTCNYSTLE SLLYLLQCIL 420
421 LNDDEITGEN IDQSLQILIK TLENILVSQE IPELILARAI LTIPRVLDKF IDALPDIKPL 480
481 TSAFLAKSLN LALKSDKELI KSATLIAFTY YCYFAELDSV LGPEVCSETQ EKVIRIINQV 540
541 SSDAEEDTNG ALMEVLSQVI SYNPKEPHSR KEILQAEFHL VFTISSEDPA NVQVVVQSQE 600
601 CLEKLLDNIN MDNYKNYIEL CLPSFINVLD SNNANNYRYS PLLSLVLEFI TVFLKKKPND 660
661 GFLPDEINQY LFEPLAKVLA FSTEDETLQL ATEAFSYLIF NTDT
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [705-915] |
1 11 21 31 41 51
| | | | | |
1 RAMEPRLMDI MKVLERLLSL EVSDSAAMNV GPLVVAIFTR FSKEIQPLIG RILEAVVVRL 60
61 IKTQNISTEQ NLLSVLCFLT CNDPKQTVDF LSSFQIDNTD ALTLVMRKWI EAFEVIRGEK 120
121 RIKENIVALS NLFFLNDKRL QKVVVNGNLI PYEGDLIITR SMAKKMPDRY VQVPLYTKII 180
181 KLFVSELSFQ SKQPNPEQLI TSDIKQEVVN A
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [916-1004] |
1 11 21 31 41 51
| | | | | |
1 NKDDDNDDWE DVDDVLDYDK LKEYIDDDVD EEADDDSDDI TGLMDVKESV VQLLVRFFKE 60
61 VASKDVSGFH CIYETLSDSE RKVLSEALL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.721 | a.47.2 | t-snare proteins |
| View | Download | 0.627 | a.7.7 | BAG domain |
| View | Download | 0.592 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.665 | a.47.2 | t-snare proteins |
| View | Download | 0.586 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.579 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.505 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.471 | a.46.1 | Methionine synthase domain |
| View | Download | 0.467 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.460 | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.444 | a.22.1 | Histone-fold |
| View | Download | 0.424 | a.2.7 | tRNA-binding arm |
| View | Download | 0.421 | a.1.1 | Globin-like |
| View | Download | 0.414 | a.24.3 | Cytochromes |
| View | Download | 0.413 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.411 | a.24.12 | Outer surface protein C (OspC) |
| View | Download | 0.407 | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.404 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.398 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.389 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.388 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.378 | a.39.1 | EF-hand |
| View | Download | 0.376 | a.24.3 | Cytochromes |
| View | Download | 0.372 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.368 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.365 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.363 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.359 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.356 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.346 | a.112.1 | Description not found. |
| View | Download | 0.346 | a.7.1 | Spectrin repeat |
| View | Download | 0.344 | a.22.1 | Histone-fold |
| View | Download | 0.342 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.338 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.337 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.331 | a.7.8 | GAT domain |
| View | Download | 0.329 | a.22.1 | Histone-fold |
| View | Download | 0.329 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.326 | a.47.2 | t-snare proteins |
| View | Download | 0.324 | a.112.1 | Description not found. |
| View | Download | 0.321 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.321 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.320 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.318 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.313 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.311 | a.7.1 | Spectrin repeat |
| View | Download | 0.308 | a.7.8 | GAT domain |
| View | Download | 0.305 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.303 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.303 | a.22.1 | Histone-fold |
| View | Download | 0.302 | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.302 | a.24.3 | Cytochromes |
| View | Download | 0.301 | a.47.2 | t-snare proteins |
| View | Download | 0.297 | a.7.7 | BAG domain |
| View | Download | 0.294 | a.2.3 | Chaperone J-domain |
| View | Download | 0.292 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.285 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.283 | a.74.1 | Cyclin-like |
| View | Download | 0.277 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.276 | a.24.3 | Cytochromes |
| View | Download | 0.273 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.268 | a.74.1 | Cyclin-like |
| View | Download | 0.267 | a.1.1 | Globin-like |
| View | Download | 0.266 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.264 | a.24.3 | Cytochromes |
| View | Download | 0.264 | a.4.1 | Homeodomain-like |
| View | Download | 0.264 | a.74.1 | Cyclin-like |
| View | Download | 0.263 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.261 | a.112.1 | Description not found. |
| View | Download | 0.260 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.255 | a.7.8 | GAT domain |
| View | Download | 0.252 | a.22.1 | Histone-fold |
| View | Download | 0.250 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.249 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.248 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.244 | a.47.2 | t-snare proteins |
| View | Download | 0.243 | a.47.2 | t-snare proteins |
| View | Download | 0.241 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.240 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.240 | a.7.1 | Spectrin repeat |
| View | Download | 0.239 | a.1.1 | Globin-like |
| View | Download | 0.238 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.233 | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.232 | d.42.1 | POZ domain |
| View | Download | 0.228 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.227 | a.25.1 | Ferritin-like |
| View | Download | 0.225 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.223 | a.2.6 | Effector domain of the protein kinase pkn/prk1 |
| View | Download | 0.222 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.219 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.219 | a.2.7 | tRNA-binding arm |
| View | Download | 0.217 | a.7.7 | BAG domain |
| View | Download | 0.216 | a.81.1 | N-terminal domain of DnaB helicase |
| View | Download | 0.216 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.215 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.214 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.211 | a.74.1 | Cyclin-like |
| View | Download | 0.211 | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.211 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.210 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.208 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.208 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.208 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.208 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.207 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.205 | a.26.1 | 4-helical cytokines |
| View | Download | 0.205 | a.47.2 | t-snare proteins |
| View | Download | 0.205 | a.118.1 | ARM repeat |
| View | Download | 0.204 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.204 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.203 | a.2.3 | Chaperone J-domain |
