| Protein: | HAL4_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 603 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAL4_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..603] | [1..603] |
|
|
0.0 | [152..598] | [33..452] |
|
|
0.0 | [160..599] | [2..420] |
|
|
0.0 | [312..595] | [15..276] |
|
|
0.0 | [312..591] | [16..273] |
|
|
0.0 | [191..590] | [296..672] |
|
Region A: Residues: [1-226] |
1 11 21 31 41 51
| | | | | |
1 MTGMNDNNAA IPQQTPRKHA LSSKVMQLFR SGSRSSRQGK ASSNIQPPSN INTNVPSASK 60
61 SAKFGLHTPT TATPRVVSNP SNTAGVSKPG MYMPEYYQSA SPSHSSSSAS LNNHIDINTS 120
121 KSSSAASLTS SVSALSLSPT SAINISSKSL SPKFSHHSNS NTAITPAPTP TASNINNVNK 180
181 ITNTSAPICG RFLVHKDGTH EHHLKNAKRQ EKLSTMIKNM VGASKL
|
| Detection Method: |  |
| Confidence: | 14.21 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [227-279] |
1 11 21 31 41 51
| | | | | |
1 RGEAKSAVPD IIMDPKTTLK SNKNPPTLFA GFMKQVVDMD DKYPEGAPTS GAL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [280-372] |
1 11 21 31 41 51
| | | | | |
1 NCPERDIYRS DQKDSKNNTH NITTTKKDRQ CFAEKYGRCQ EVLGKGAFGV VRICQKKNVS 60
61 SQDGNKSEKL YAVKEFKRRT SESAEKYSKR LTS
|
|
Region B: Residues: [389-404] |
1 11 21 31 41 51
| | | | | |
1 LDLFQDAKGE YCEVME
|
| Detection Method: | |
| Confidence: | 397.67837 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [373-388] |
1 11 21 31 41 51
| | | | | |
1 EFCISSSLHH TNIVTT
|
|
Region B: Residues: [405-414] |
1 11 21 31 41 51
| | | | | |
1 YCAGGDLFTL
|
|
Region C: Residues: [430-482] |
1 11 21 31 41 51
| | | | | |
1 FKQLIRGVVY MHEMGVCHRD LKPENLLLTH DGVLKITDFG NSECFKMAWE KNI
|
| Detection Method: | |
| Confidence: | 397.67837 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [415-429] |
1 11 21 31 41 51
| | | | | |
1 VVAAGKLEYM EADCF
|
|
Region B: Residues: [483-603] |
1 11 21 31 41 51
| | | | | |
1 HLSGGVCGSS PYIAPEEYIK EEFDPRPVDI WACGVIYMAM RTGRQLWSSA EKDDPFYMNY 60
61 LKGRKEKGGY EPIESLKRAR CRNVIYSMLD PVPYRRINGK QILNSEWGRE IKCCHNGRAL 120
121 K
|
| Detection Method: | |
| Confidence: | 397.67837 |
| Match: | 1ia8A_ |
| Description: | Cell cycle checkpoint kinase chk1 |
| Matching Structure (courtesy of the PDB): |
|
