| Protein: | ATG13_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 738 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG13_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
450.0 | [0..10] | [470..39] |
|
|
372.0 | [0..10] | [737..8] |
|
|
338.0 | [0..248] | [577..373] |
|
|
325.0 | [0..4] | [437..62] |
|
|
311.0 | [0..8] | [431..11] |
|
|
302.0 | [0..9] | [434..13] |
|
|
281.0 | [0..9] | [459..11] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MVAEEDIEKQ VLQLIDSFFL KTTLLICSTE SSRYQSSTEN IFLFDDTWFE DHSELVSELP 60
61 EIISKWSHYD GRKELPPLVV ETYLDLRQLN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.654 | a.29.2 | Bromodomain |
| View | Download | 0.648 | a.29.2 | Bromodomain |
| View | Download | 0.648 | a.29.2 | Bromodomain |
| View | Download | 0.552 | a.29.2 | Bromodomain |
| View | Download | 0.487 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.487 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.483 | d.6.1 | Prion-like |
| View | Download | 0.458 | g.53.1 | TAZ domain |
| View | Download | 0.386 | a.29.2 | Bromodomain |
| View | Download | 0.378 | a.12.1 | Kix domain of CBP (creb binding protein) |
|
Region A: Residues: [91-244] |
1 11 21 31 41 51
| | | | | |
1 SSHLVRLKDH EGHLWNVCKG TKKQEIVMER WLIELDNSSP TFKSYSEDET DVNELSKQLV 60
61 LLFRYLLTLI QLLPTTELYQ LLIKSYNGPQ NEGSSNPITS TGPLVSIRTC VLDGSKPILS 120
121 KGRIGLSKPI INTYSNALNE SNLPAHLDQK KITP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [245-600] |
1 11 21 31 41 51
| | | | | |
1 VWTKFGLLRV SVSYRRDWKF EINNTNDELF SARHASVSHN SQGPQNQPEQ EGQSDQDIGK 60
61 RQPQFQQQQQ PQQQQQQQQQ QQRQHQVQTQ QQRQIPDRRS LSLSPCTRAN SFEPQSWQKK 120
121 VYPISRPVQP FKVGSIGSQS ASRNPSNSSF FNQPPVHRPS MSSNYGPQMN IEGTSVGSTS 180
181 KYSSSFGNIR RHSSVKTTEN AEKVSKAVKS PLQPQESQED LMDFVKLLEE KPDLTIKKTS 240
241 GNNPPNINIS DSLIRYQNLK PSNDLLSEDL SVSLSMDPNH TYHRGRSDSH SPLPSISPSM 300
301 HYGSLNSRMS QGANASHLIA RGGGNSSTSA LNSRRNSLDK SSNKQGMSGL PPIFGG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [601-738] |
1 11 21 31 41 51
| | | | | |
1 ESTSYHHDNK IQKYNQLGVE EDDDDENDRL LNQMGNSATK FKSSISPRSI DSISSSFIKS 60
61 RIPIRQPYHY SQPTTAPFQA QAKFHKPANK LIDNGNRSNS NNNNHNGNDA VGVMHNDEDD 120
121 QDDDLVFFMS DMNLSKEG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.289 | b.1.2 | Fibronectin type III |
| View | Download | 0.245 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.245 | a.24.17 | Group V grass pollen allergen |
