YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|20515541, gi\|...
Organism:	Thermoanaerobacter tengcongensis MB4
Length:	279 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20515541, gi|....

Description	E-value	Query Range	Subject Range
gi\|13366133 - gi\|13366133\|dbj\|BAB39459.1\| BioH [Kurthia sp. 538-KA26]	191.0	[0..1]	[265..1]
gi\|71555648, gi\|... - gi\|71735095\|ref\|YP_276638.1\| arylesterase [Pseudomonas syringae pv. phaseolicola 1448A], gi\|71555648...	190.0	[0..1]	[264..88]
gi\|23126850, gi\|... - gi\|23126850\|ref\|ZP_00108734.1\| COG0596: Predicted hydrolases or acyltransferases (alpha/beta hydrola...	189.0	[0..1]	[265..1]
gi\|63258412, gi\|... - gi\|66047705\|ref\|YP_237546.1\| Alpha/beta hydrolase fold [Pseudomonas syringae pv. syringae B728a], gi...	189.0	[0..1]	[264..1]
tr\|Q889S4\|Q889S4... - Arylesterase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_0675 PE=4 SV=1 gi\|28867903, gi\|... - gi\|28867903\|ref\|NP_790522.1\| arylesterase [Pseudomonas syringae pv. tomato str. DC3000], gi\|28851139...	188.0	[0..1]	[265..1]
gi\|68529012, gi\|... - gi\|94314231\|ref\|YP_587440.1\| alpha/beta hydrolase fold [Ralstonia metallidurans CH34], gi\|93358083\|g...	187.0	[0..1]	[264..1]
gi\|78066438, gi\|... - gi\|78066438\|ref\|YP_369207.1\| Alpha/beta hydrolase [Burkholderia sp. 383], gi\|77967183\|gb\|ABB08563.1\|...	187.0	[0..1]	[264..1]
gi\|77383490, gi\|... - gi\|77459487\|ref\|YP_348994.1\| Alpha/beta hydrolase fold [Pseudomonas fluorescens Pf0-1], gi\|77383490\|...	186.0	[0..1]	[265..1]
gi\|77997153, gi\|... - gi\|78045038\|ref\|YP_360549.1\| alpha/beta fold family hydrolase [Carboxydothermus hydrogenoformans Z-2...	185.0	[0..1]	[265..1]

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Predicted Domain #1

Region A:
Residues: [1-279]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKITVNNVS LYYEIHGNGS PLVLIEGLGC SKWMWFKQID ELKKHFKVIV FDLRGVGDSE  60
   61 KPDMEYSIKL LADDTAALVA ELGFKKVHVL GVSMGGYIAQ ELALEYPDLV DRLILCSTHY 120
  121 GGPNIVPIPL STLNIILNGA GLRNALENLR IAMSLNFSDE YLSTHKDEFE QIVKWKFEKP 180
  181 QPFYAYRRQL YAALTFDEEA RIHLIKHPTL IMAGKDDKVV PYENALLLHS KIENSEIELF 240
  241 SNAGHMFFIE KAEEVNRKII EFLTKPIGGD KKWEEKMLM

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	46.045757
Match:	1va4A
Description:	Pseudomonas fluorescens aryl esterase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
hydrolase activity	1.75934962198703	bayes_pls_golite062009
catalytic activity	1.39629727416851	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.81726006983431	bayes_pls_golite062009
oxidoreductase activity	0.750813249689634	bayes_pls_golite062009
binding	0.112743564301567	bayes_pls_golite062009
carboxylesterase activity	0.0264147222103929	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: