| Protein: | CCDS1876.1_1 |
| Organism: | Chlorocebus aethiops |
| Length: | 418 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCDS1876.1_1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..418] | [1..420] |
|
|
0.0 | [1..418] | [1..420] |
|
|
0.0 | [1..418] | [1..420] |
|
|
0.0 | [1..418] | [1..419] |
|
|
0.0 | [1..418] | [1..419] |
|
|
0.0 | [1..418] | [1..418] |
|
Region A: Residues: [1-167] |
1 11 21 31 41 51
| | | | | |
1 MFSPDQENHP SKAPVKYGEL IVLGYNGSLP NGDRGRRKSR FALFKRPKAN GVKPSTVHIA 60
61 CTPQAAKAIS NKDQHSISYT LSRAQTVVVE YTHDSNTDMF QIGRSTESPI DFVVTDTVPG 120
121 SQSNSDTQSV QSTISRFACR IICERNPPFT ARIYAAGFDS SKNIFLG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [168-257] |
1 11 21 31 41 51
| | | | | |
1 EKAAKWKTSD GQMDGLTTNG VLVMHPRNGF TEDSKPGIWR EISVCGNVFS LRETRSAQQR 60
61 GKMVEIETNQ LQDGSLIDLC GATLLWRTAE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [258-328] |
1 11 21 31 41 51
| | | | | |
1 GLSHTPTVKH LEALRQEINA ARPQCPVGFN TLAFPSMKRK DVVDEKQPWV YLNCGHVHGY 60
61 HNWGNKEERD G
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [329-418] |
1 11 21 31 41 51
| | | | | |
1 KDRECPMCRS VGPYVPLWLG CEAGFYVDAG PPTHAFSPCG HVCSEKTTAY WSQIPLPHGT 60
61 HTFHAACPFC AHQLAGEQGY IRLIFQGPLD
|
| Detection Method: | |
| Confidence: | 1.12 |
| Match: | 1e4uA |
| Description: | Not-4 N-terminal RING finger domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.06923986676721 | bayes_pls_golite062009 |
| protein binding | 1.48593945455888 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.324292450240439 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.248014157054608 | bayes_pls_golite062009 |
