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View Structure Prediction Details

Protein: gi|53982670, gi|...
Organism: Oryza sativa Japonica Group
Length: 352 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|53982670, gi|....

Description E-value Query
Range
Subject
Range
gi|56785229, gi|... - gi|56785229|dbj|BAD82117.1| unknown protein [Oryza sativa Japonica Group], gi|50902250|ref|XP_463558...
337.0 [0..1] [350..1]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWALNLKAGG GGPCLTPRRR PLAAGEAAPC SVAAAWAGRR VGGRRGMALV AVGASGRRGK  60
   61 DGPGGGDGGD DEAKSKASSS SGNDDAASTG DSSDGLNQLH NESKSNISNS NYWRDVRANL 120
  121 VRREQELLVD PSAPAEQKTS SGEPAHQLPQ KWAHP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITMPEAGCVL VATEVLDDDS IFERTVILLL RLGSRGTFDS PFGVILNRPL YTKIKNVNPS  60
   61 FQDQATPFGD SPLFFGGPVD MSMFLVRASD NSRLKGFEEV IPGIRFGFRT DLEKAAVLMK 120
  121 SGAIKSQDLR FFVGHAAWDY EQLLSEIRAG YWAVASCSTE LISDALTGDP SCLWTEILQL 180
  181 MGGHYSELSQ KPKEDNQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.69897
Match: 2hafA
Description: No description for 2hafA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle