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View Structure Prediction Details

Protein: gi|53982670, gi|...
Organism: Oryza sativa Japonica Group
Length: 352 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|53982670, gi|....

Description E-value Query
Range
Subject
Range
gi|56785229, gi|... - gi|56785229|dbj|BAD82117.1| unknown protein [Oryza sativa Japonica Group], gi|50902250|ref|XP_463558...
337.0 [0..1] [350..1]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWALNLKAGG GGPCLTPRRR PLAAGEAAPC SVAAAWAGRR VGGRRGMALV AVGASGRRGK  60
   61 DGPGGGDGGD DEAKSKASSS SGNDDAASTG DSSDGLNQLH NESKSNISNS NYWRDVRANL 120
  121 VRREQELLVD PSAPAEQKTS SGEPAHQLPQ KWAHP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ITMPEAGCVL VATEVLDDDS IFERTVILLL RLGSRGTFDS PFGVILNRPL YTKIKNVNPS  60
   61 FQDQATPFGD SPLFFGGPVD MSMFLVRASD NSRLKGFEEV IPGIRFGFRT DLEKAAVLMK 120
  121 SGAIKSQDLR FFVGHAAWDY EQLLSEIRAG YWAVASCSTE LISDALTGDP SCLWTEILQL 180
  181 MGGHYSELSQ KPKEDNQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.69897
Match: 2hafA
Description: No description for 2hafA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle