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View Structure Prediction Details

Protein: FRO2_ARATH
Organism: Arabidopsis thaliana
Length: 725 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRO2_ARATH.

Description E-value Query
Range
Subject
Range
gi|25309854, gi|... - gi|8920594|gb|AAF81316.1|AC061957_12 Identical to FRO2 protein from Arabidopsis thaliana gb|Y09581 a...
569.0 [0..1] [725..1]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIEKSNNGG SNPSAGEEFK DMIKGVTKFL MMVIFLGTIM LWIMMPTLTY RTKWLPHLRI  60
   61 KFGTSTYFGA TGTTLFMYMF PMMVVACLGC VYLHFKNRKS PHHIDRETKG GVWSKLRKPM 120
  121 LVKGPL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [127-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIVSVTEITF LAMFVALLLW CFITYLRNSF ATITPKSAAA HDESLWQAKL ESAALRLGLI  60
   61 GNICLAFLFL PVARGSSLLP AMGLTSESSI KYHIWLGHMV MALFTVHGLC YIIYWASMHE 120
  121 ISQMIMWDTK GVSNLAGEIA LAAGLVMWAT TYPKIRRRFF EVFFYTHYLY IVFMLFFVL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.585027
Match: PF01794.10
Description: No description for PF01794.10 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [306-594]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HVGISFSFIA LPGFYIFLVD RFLRFLQSRE NVRLLAARIL PSDTMELTFS KNSKLVYSPT  60
   61 SIMFVNIPSI SKLQWHPFTI TSSSKLEPEK LSIVIKKEGK WSTKLHQRLS SSDQIDRLAV 120
  121 SVEGPYGPAS ADFLRHEALV MVCGGSGITP FISVIRDLIA TSQKETCKIP KITLICAFKK 180
  181 SSEISMLDLV LPLSGLETEL SSDINIKIEA FITRDNDAGD EAKAGKIKTL WFKPSLSDQS 240
  241 ISSILGPNSW LWLGAILASS FLIFMIIIGI ITRYYIYPID HNTNKIYSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.522879
Match: 1cqxA
Description: Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.52421953607929 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [595-725]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSKTIIYILV ISVSIMATCS AAMLWNKKKY GKVESKQVQN VDRPSPTSSP TSSWGYNSLR  60
   61 EIESTPQESL VQRTNLHFGE RPNLKKLLLD VEGSSVGVLV CGPKKMRQKV AEICSSGLAE 120
  121 NLHFESISFS W

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 7.045757
Match: PF08030.3
Description: No description for PF08030.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle