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View Structure Prediction Details

Protein: DPOD2_ARATH
Organism: Arabidopsis thaliana
Length: 440 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DPOD2_ARATH.

Description E-value Query
Range
Subject
Range
gi|42569857 - gi|42569857|ref|NP_181742.2| POLD2 (DNA POLYMERASE DELTA SMALL SUBUNIT); DNA binding / DNA-directed ...
505.0 [0..1] [440..1]

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Predicted Domain #1
Region A:
Residues: [1-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIDSEKIHE RKQSDYNSLD ERFEIQKEMY RGQQYSQIYF ARLHLMRTLL YSLAPTWKSH  60
   61 LPVCKVLGLE KGKECIIVGT LFKHMKLKPC VLDEYSKERS VTPLVKPHNF MHPDDNLILE 120
  121 DESGRVKLAG SALSPAIYVT GVVVALHGKE TNAGEFFVED VLEAGLPPQI ERPIDLQEDK 180
  181 YVVLLSGLCI GSKSANPLQF QLLVDHITGH LGDEEEQGLA AQIVHVVIAG NSFEFPRKLI 240
  241 NGQNLASKDQ STLYEPIKEL DIMLSQIAAG VSVDIMPGTN DPANFALPQQ PLNRCLFPGS 300
  301 SPYNTFRSCT NPHSFDVDNI RFLGTSGQNI DDLGKYSEAK SKLDFVERTL RWRHLAPTAP 360
  361 NTLGCYPFTD RDPFLIETCP HVYFVGNQDK YDNRLIKGSE GQLVRLICIP KFCETGIAVA 420
  421 VNLRNLECHT LSFSTQINQS 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.0
Match: 1xzwA
Description: Sweet potato purple acid phosphatase/phosphate complex
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle