| Protein: | OCP3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 354 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OCP3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
211.0 | [0..39] | [350..37] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MIKAMALSSA GVVSHLHPPS FSSSSGLSVN RVLFRNRNAS PCGLSLPILN PSRSVLVFAR 60
61 GKNRKGFVSS SSSSPKKNKK KSLDGADNGG GEEEEDPFEA LFNLLEEDLK NDNSDDEEIS 120
121 EEELEALADE LARALGVGDD VDDIDLFGSV TGDVDVDVDN
|
| Detection Method: |  |
| Confidence: | 31.39794 |
| Match: | 1k78A |
| Description: | Pax-5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [161-354] |
1 11 21 31 41 51
| | | | | |
1 DDDDNDDDDN DDDDDDSEED ERPTKLKNWQ LKRLAYALKA GRRKTSIKNL AAEVCLDRAY 60
61 VLELLRDPPP KLLMLSATLP DEKPPVAAPE NSSPDPSPVE SLSAEDVVVE PKEKVKDEAV 120
121 HVMQQRWSAQ KRVKKAHIET LEKVYRRSKR PTNAVVSSIV QVTNLPRKRV LKWFEDKRAE 180
181 DGVPDKRAPY QAPV
|
| Detection Method: | |
| Confidence: | 6.045757 |
| Match: | 2d5vA |
| Description: | No description for 2d5vA was found. |
