| Protein: | gi|79494602, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 627 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|79494602, gi|....
| Description | E-value | Query Range |
Subject Range |
|
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240.0 | [0..2] | [626..448] |
|
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236.0 | [0..2] | [626..445] |
|
Region A: Residues: [1-325] |
1 11 21 31 41 51
| | | | | |
1 MKEDERTEKA IRSLLKLPEN RRCINCNSLG PQYVCSTFWT FVCVNCSGIH REFTHRVKSV 60
61 SMAKFTADEV SALRAGGNER ARQIYFKEWD AHRDGYPDRS NIFKLRDFIR SVYVDKRYSS 120
121 SDKISQQKSD VTEDYRESKK TSAHVLGSRS LHSVDKSDIE RSSAAGRSGS ESLRFYFDDK 180
181 NHKQQHVTHN PRSRGLPKSP IRFEIVDDRF RDDGSVKRYD ARKDSRGSSK SLDLSSNKDM 240
241 PSFPIVRHTS ELNIVKVEKK KDPVNNQMTA SSEKMEIPRS LIDDVPVSEL SDEGIIKNSS 300
301 EIPASLKTTE EPAPNSLEAL LFGSS
|
| Detection Method: |  |
| Confidence: | 41.39794 |
| Match: | 1dcqA |
| Description: | Pyk2-associated protein beta; Pyk2-associated protein beta ARF-GAP domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [326-413] |
1 11 21 31 41 51
| | | | | |
1 VPSVVPGTNN YELWNTSDIS STENYTAVNL GTQTMPGIPD SVTSFATSPT TAHAHSGSSG 60
61 PVVPVAPDNL NTKETATLAN NQGPSDFS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [414-627] |
1 11 21 31 41 51
| | | | | |
1 MEQTTLAITD YAHGVGSEHH QDDETQSSIR KALPEDLFTG GFSFAPQQVH GQHHGMGYGM 60
61 QYYQYPVAMG ALTYTAKAAN PFDLSYDDTA PNQTPQFPTM AYVQGGGLPH VSSPIGYSDS 120
121 SSPAADSIGL MTSQSPFHAT ALSPNSPALA SHLSPGALMG QQSQVNMSPS FRQEYSGLGT 180
181 EGNTFNGVHT FHQANNGYPS ANPNAYVSRG NPFE
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
