| Protein: | VP35A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 787 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VP35A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
892.0 | [0..4] | [787..426] |
|
|
882.0 | [0..4] | [787..7] |
|
|
879.0 | [0..4] | [787..7] |
|
|
873.0 | [0..4] | [787..7] |
|
|
872.0 | [0..4] | [787..7] |
|
|
872.0 | [0..4] | [787..7] |
|
Region A: Residues: [1-174] |
1 11 21 31 41 51
| | | | | |
1 MIADGSEDEE KWLAAGAAAF KQNAFYMQRA IDSNNLKDAL KYSAQMLSEL RTSKLSPHKY 60
61 YDLYMRAFDE LRKLEIFFME ETRRGCSVIE LYELVQHAGN ILPRLYLLCT AGSVYIKTKE 120
121 APAKEILKDL VEMCRGIQHP LRGLFLRSYL AQISRDKLPD IGSEYEGDAD TVID
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [175-350] |
1 11 21 31 41 51
| | | | | |
1 AVEFVLLNFT EMNKLWVRMQ HQGPAREKER REKERGELRD LVGKNLHVLS QLEGVDLDMY 60
61 RDTVLPRVLE QIVNCRDEIA QYYLIDCIIQ VFPDEYHLQT LDVLLGACPQ LQASVDIMTV 120
121 LSRLMERLSN YAALNAEVLP YFLQVEAFSK LNNAIGKVIE AQEDMPILSA VTLYSS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [351-471] |
1 11 21 31 41 51
| | | | | |
1 LLKFTLHVHP DRLDYADQVL GSCVKQLSGK GKIDDTRATK ELVSLLSAPL EKYNDVVTAL 60
61 KLTNYPLVVE YLDTETKRIM ATVIVRSIMK NNTLITTAEK VEALFELIKG IINDLDEPQG 120
121 L
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [472-787] |
1 11 21 31 41 51
| | | | | |
1 EVDEDDFQEE QNSVALLIHM LYNDDPEEMF KIVNVLKKHF LTGGPKRLKF TIPPLVVSTL 60
61 KLIRRLPVEG DNPFGKEASV TATKIFQFLN QIIEALPNVP SPDLAFRLYL QCAEAADKCD 120
121 EEPIAYEFFT QAYILYEEEI SDSKAQVTAL QLIIGTLQRM QVFGVENRDT LTHKATGYAA 180
181 KLLKKPDQCR AVYACSHLFW LEDRETIQDG ERVLLCLKRA LKIANSAQQV ANTARGSTGS 240
241 VTLFIEILNK YLYFYEKGVP QITVESVESL IKLIKNEESM PSDPSAESFF ATTLEFMEFQ 300
301 KQKEGAIGER YQAIKV
|
| Detection Method: | |
| Confidence: | 89.39794 |
| Match: | 2r17C |
| Description: | No description for 2r17C was found. |
