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View Structure Prediction Details

Protein: PPT2_ARATH
Organism: Arabidopsis thaliana
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPT2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21537050 - gi|21537050|gb|AAM61391.1| putative phosphate/phosphoenolpyruvate translocator [Arabidopsis thaliana...
191.0 [0..1] [383..1]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFALTFLNPN PRLPSPLFLA KSTPESALSR RSRAFSSSNS YPWRPNLRFN GFKLKSATVP  60
   61 ENVEGGDLES GSL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKGLKLGGMF GVWYLLNIYY NIFNKQVLRV YPYPATVTAF QLGCGTLMIA IMWLLKLHPR  60
   61 PKFSPSQFTV IVQLAVAHTL GNLLTNVSLG RVNVSFTHTI KAMEPFFTVL LSVLLLGEWP 120
  121 SLWIVCSLLP IVAGVSLASF TEASF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.06
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [219-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NWIGFCSAMA SNVTNQSRNV LSKKFMVGKD ALDNINLFSI ITIISFILLV PLAILIDGFK  60
   61 VTPSHLQVAT SQGLSVKEFC IMSLLAGVCL HSYQQVSYMI LEMVSPVTHS VGNCVKRVVV 120
  121 ITSSILFFKT PVSPLNSIGT ATALAGVYLY SRAKRVQVKP NPKMS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle