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View Structure Prediction Details

Protein: PPT2_ARATH
Organism: Arabidopsis thaliana
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPT2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21537050 - gi|21537050|gb|AAM61391.1| putative phosphate/phosphoenolpyruvate translocator [Arabidopsis thaliana...
191.0 [0..1] [383..1]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFALTFLNPN PRLPSPLFLA KSTPESALSR RSRAFSSSNS YPWRPNLRFN GFKLKSATVP  60
   61 ENVEGGDLES GSL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKGLKLGGMF GVWYLLNIYY NIFNKQVLRV YPYPATVTAF QLGCGTLMIA IMWLLKLHPR  60
   61 PKFSPSQFTV IVQLAVAHTL GNLLTNVSLG RVNVSFTHTI KAMEPFFTVL LSVLLLGEWP 120
  121 SLWIVCSLLP IVAGVSLASF TEASF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.06
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [219-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NWIGFCSAMA SNVTNQSRNV LSKKFMVGKD ALDNINLFSI ITIISFILLV PLAILIDGFK  60
   61 VTPSHLQVAT SQGLSVKEFC IMSLLAGVCL HSYQQVSYMI LEMVSPVTHS VGNCVKRVVV 120
  121 ITSSILFFKT PVSPLNSIGT ATALAGVYLY SRAKRVQVKP NPKMS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle