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View Structure Prediction Details

Protein: Y4139_ARATH
Organism: Arabidopsis thaliana
Length: 682 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y4139_ARATH.

Description E-value Query
Range
Subject
Range
gi|79325958 - gi|79325958|ref|NP_001031763.1| ABC1 family protein [Arabidopsis thaliana]
486.0 [0..1] [682..1]

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Predicted Domain #1
Region A:
Residues: [1-548]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESIHCNSLL NPNFSLNQRR RRINHAVLNR RDALLRSLNA VELRRSRTFS AVRTSNFSVT  60
   61 AAATDVGGRN STDASVMTTA MSGVERGVRV GKSSSALEQL DIERGVCVPF RKYSPETVRS 120
  121 KVLESRGAVV SLVSRGVEIV WTLGLYWSTL TYDFLVGRDE EVVPFRARQL RNLLCNLGPS 180
  181 FIKAGQVLAN RPDIIREDYM NELCILQDDV PPFPNEVAFN IIEEELGQPL ENIFSKISSQ 240
  241 TIAAASLGQV YRATLRATGE DVAIKVQRPQ IEPIIYRDLF LFRTLASFLN GFSLQKLGCN 300
  301 AELIVDEFGE KLLEELDYTL EARNIEDFLE NFKDDPTVKI PGVYKNLCGP RVLVMEWIDG 360
  361 IRCTDPQAIK DAGIDLNGFL TVGVSAALRQ LLEFGLFHGD PHPGNIFAMQ DGRIAYVDFG 420
  421 NVAVLSQQNK QILIDAVVHA VNEDYGEMAN DFTRLGFLAK DTDVSPIVPA LEAIWQNSAG 480
  481 KGLADFNFRS VTGQFNKLVY DFPIRIPERF SLVIRSLLTQ EGICFTLKPD FKFLEVAYPY 540
  541 VAKRLLTD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.522879
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 1.58699080719302 bayes_pls_golite062009
transferase activity 1.29717608790759 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.21088492986025 bayes_pls_golite062009
kinase activity 1.16854637967869 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.10694163833843 bayes_pls_golite062009
protein kinase activity 1.05289537088768 bayes_pls_golite062009
protein serine/threonine kinase activity 0.481959842887182 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [549-682]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNPALRERLI QVLFKDGVFQ WKRLENLLSL AKENVAKMSS NPNLRVKRVE SKLDLTDTIK  60
   61 DGARLFLLDE GIRRKLILAL TEDSKLHVEE LVDVYRLVED EVDIPTLAMQ VVQDLPNVFR 120
  121 DFVLSWSNSV LSDR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.39794
Match: 2ozaA
Description: No description for 2ozaA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle