| Protein: | SGT1_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 395 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SGT1_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-84 | [1..395] | [1..395] |
|
|
2.0E-78 | [4..395] | [6..371] |
|
|
2.0E-75 | [4..395] | [6..365] |
|
|
6.0E-72 | [61..395] | [30..336] |
|
|
1.0E-71 | [42..395] | [6..325] |
|
|
2.0E-70 | [4..395] | [2..348] |
|
|
6.0E-70 | [55..395] | [24..333] |
|
Region A: Residues: [1-54] |
1 11 21 31 41 51
| | | | | |
1 MPVEKDLKTA YKALYDEKEP LKALHLYDEI LKGSPTNLTA LIFKAACLEK LYFG
|
| Detection Method: |  |
| Confidence: | 22.221849 |
| Match: | 1a17__ |
| Description: | Protein phosphatase 5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 6.63746543212322 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 6.37753885031863 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 5.68162115570289 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 4.89523122092864 | bayes_pls_golite062009 |
| binding | 2.07985546140154 | bayes_pls_golite062009 |
| ligase activity | 1.72049482453565 | bayes_pls_golite062009 |
| protein binding | 1.6279032205159 | bayes_pls_golite062009 |
| signal sequence binding | 0.0492289984665799 | bayes_pls_golite062009 |
|
Region A: Residues: [55-232] |
1 11 21 31 41 51
| | | | | |
1 FSDWHSDATM ENAKELLDKA LMTAEGRGDR SKIGLVNFRY FVHFFNIKDY ELAQSYFKKA 60
61 KNLGYVDDTL PLWEDRLETK LNKKNKKQKD STNKHTIKPV ESIENRGDNN SSHSPISPLK 120
121 IETAPQESPK FKIDWYQSST SVTISLFTVN LPESKEQVNI YISPNDRRTL SISYQVPK
|
| Detection Method: | |
| Confidence: | 2.045757 |
| Match: | 1d8dA_ |
| Description: | Protein farnesyltransferase alpha-subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [233-316] |
1 11 21 31 41 51
| | | | | |
1 SGSEFQYNAK LSHEVDPKAV SLKIFPKKLE ITLSKIDSTQ WKKLEEDILT ESSRLSDEGK 60
61 NSDSATRLLS AETASKERLS YPSS
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 1lg0A_ |
| Description: | No description for 1lg0A_ was found. |
|
Region A: Residues: [317-395] |
1 11 21 31 41 51
| | | | | |
1 SKKKIDWSKL DIDEEADEEA GSADSFFQKL YAGADPDTKR AMMKSFIESN GTALSTDWED 60
61 VSKGTVKTSP PEGMEPKHW
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.328 | a.4.1 | Homeodomain-like |
| View | Download | 0.303 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.368 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.363 | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| View | Download | 0.380 | c.98.1 | MurE/MurF N-terminal domain |
| View | Download | 0.278 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.267 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.260 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.248 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.248 | a.64.1 | Saposin |
| View | Download | 0.246 | c.98.1 | MurE/MurF N-terminal domain |
| View | Download | 0.243 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.243 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.234 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.217 | a.28.1 | ACP-like |
| View | Download | 0.204 | a.118.8 | TPR-like |
