Protein: | SPB4_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 606 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPB4_YEAST.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..606] | [1..606] |
|
0.0 | [6..409] | [148..533] |
|
0.0 | [6..408] | [181..579] |
|
0.0 | [6..431] | [180..602] |
|
0.0 | [3..405] | [135..518] |
|
0.0 | [5..406] | [194..589] |
|
0.0 | [6..422] | [172..583] |
|
0.0 | [7..409] | [151..535] |
Region A: Residues: [1-231] |
1 11 21 31 41 51 | | | | | | 1 MSKSLEWDNL GFSLLPWIRT GLDVMGFETM TPVQASTIPM LAGNKDVVVD SVTGSGKTAA 60 61 FVIPVLEKVV KEEANTSKFK KAHFHSLIIA PTRELSRQIE SVVLSFLEHY PSDLFPIKCQ 120 121 LLVGTNEATV RDDVSNFLRN RPQILIGTPG RVLDFLQMPA VKTSACSMVV MDEADRLLDM 180 181 SFIKDTEKIL RLLPKQRRTG LFSATMRSAG SDIFKTGLRN PVRITVNSKN Q |
Detection Method: | |
Confidence: | 431.0 |
Match: | 1hv8A_ |
Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [232-388] |
1 11 21 31 41 51 | | | | | | 1 APSSLKLNYC VVNPAEKLQL LVSILNNYKF KKCIVYFPTC VSVSYFYSFI QYLGKRNILV 60 61 NEVEIFSLHG KLQTSARTKT LTAFTDSLSN SVLFTTDVAA RGIDIPDVDL VIQLDPPTNT 120 121 DMFMHRCGRT GRANRVGKAI TFLNEGREED FIPFMQV |
Detection Method: | |
Confidence: | 431.0 |
Match: | 1hv8A_ |
Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [389-519] |
1 11 21 31 41 51 | | | | | | 1 KNVELEELDL EVKGITTNFY EDFRNWILED RDRFDKGVKA YVAFIKYYSN HSATSIFRLQ 60 61 SLDYVGIAKL YGLFRLPRMP EITKYLATEK QEGIFPGNWL VDPPVNMDEY KYKDKKREKE 120 121 RQETLKNISL I |
Detection Method: | |
Confidence: | 10.0 |
Match: | 1d9xA_ |
Description: | Nucleotide excision repair enzyme UvrB |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [520-606] |
1 11 21 31 41 51 | | | | | | 1 NDKKKLKSEL KKKNLAWSDK TLTKERKLER KEKMSLKRKA IEEELKAEEL DENAEEERIK 60 61 EDWKEIVLQN KRKKVSSKAI QGNFDDL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.