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View Structure Prediction Details

Protein: ENSMMUT000000325...
Organism: Macaca mulatta
Length: 331 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ENSMMUT000000325....

Description E-value Query
Range
Subject
Range
gi|74151210, gi|... - gi|74151210|dbj|BAE27725.1| unnamed protein product [Mus musculus], gi|74147160|dbj|BAE27488.1| unna...
0.0 [1..331] [1..329]
gi|108743256 - gi|108743256|dbj|BAE95404.1| LIM-domain-binding protein 2b [Gallus gallus]
0.0 [1..331] [1..330]
LDB2 - LIM domain binding 2
gi|109073801 - gi|109073801|ref|XP_001101329.1| PREDICTED: similar to LIM domain binding 2 isoform 2 [Macaca mulatt...
gi|123982183, gi... - gi|123996991|gb|ABM86097.1| LIM domain binding 2 [synthetic construct], gi|123982183|gb|ABM82907.1| ...
CCDS3420.1_1 - null
gi|67970922 - gi|67970922|dbj|BAE01803.1| unnamed protein product [Macaca fascicularis]
0.0 [1..314] [1..314]
gi|86820695, gi|... - gi|86820695|gb|AAI05322.1| LIM domain binding 2 [Bos taurus], gi|114051570|ref|NP_001040076.1| LIM d...
0.0 [1..314] [1..312]
gi|114593280 - gi|114593280|ref|XP_001161726.1| PREDICTED: LIM domain binding 2 isoform 2 [Pan troglodytes]
0.0 [1..314] [1..314]
gi|157822259, gi... - gi|157822259|ref|NP_001099479.1| LIM domain binding 2 [Rattus norvegicus], gi|149047267|gb|EDL99936....
0.0 [1..314] [1..314]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTPHDPFY SSPFGPFYRR HTPYMVQPEY RIYEMNKRLQ SRTEDSDNLW WDAFATEFFE  60
   61 DDATLTLSFC LEDGPKRYTI GRTLIPRYFS TVFEGGVTDL YYILKHSKES YHNSSITVDC 120
  121 DQCTMVTQHG KPMFTKVCTE GRLILEFTFD DLMRIKTWHF TIRQYRELVP RSILAMHAQD 180
  181 PQVLDQLSKN ITRMGLTNF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.551 N/A N/A b.63.1 Oncogene products
View Download 0.519 N/A N/A c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.486 N/A N/A b.63.1 Oncogene products
View Download 0.441 N/A N/A c.23.3 Hypothetical protein MTH538
View Download 0.401 N/A N/A a.118.8 TPR-like

Predicted Domain #2
Region A:
Residues: [200-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLNYLRLCVI LEPMQELMSR HKTYNLSPRD CLKTCLFQKW QRMVAPPAEP TRQPTTKRRK  60
   61 RKNSTSSTSN SSAGNNANST GSKKKTTAAN LSLSSQVPGL GAIPNCSLNP GRDGDLCHST 120
  121 AVTPSGQFKE KH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle