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View Structure Prediction Details

Protein: ACCA_ARATH
Organism: Arabidopsis thaliana
Length: 769 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACCA_ARATH.

Description E-value Query
Range
Subject
Range
gi|62319750 - gi|62319750|dbj|BAD93727.1| carboxyltransferase alpha subunit [Arabidopsis thaliana]
527.0 [0..1] [728..1]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASISHSSLA LGGASSASAS DYLRSSSNGV NGVPLKTLGR AVFTTIRRKD LAVTSRLKKG  60
   61 KKFEHPWPAN PDPNVKGGVL SYLAEFKPL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [90-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDTQKPVTLD FEKPLVELEK KIVDVRKMAN ETGLDFTEQI ITLENKYRQA LKDLYTHLTP  60
   61 IQRVNIARHP NRPTFLDHIH NITDKFMELH GDRAGYDDPA IVTGIGTIDG KRYMFIGHQK 120
  121 GRNTKENIMR NFGMPTPHGY RKALRMMYYA DHHGFPIVTF IDTPGAYADL KSEELGQGEA 180
  181 IANNLRTMFG LKVPILSIVI G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 2f9yA
Description: No description for 2f9yA was found.

Predicted functions:

Term Confidence Notes
acetyl-CoA carboxylase activity 10.6452464693016 bayes_pls_golite062009
CoA carboxylase activity 10.4560118435089 bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds 10.291155621143 bayes_pls_golite062009
ligase activity 5.44906329604668 bayes_pls_golite062009
biotin carboxylase activity 4.73758144982083 bayes_pls_golite062009
enoyl-CoA hydratase activity 2.20341273353803 bayes_pls_golite062009
catalytic activity 1.46154163027498 bayes_pls_golite062009
3-hydroxyacyl-CoA dehydrogenase activity 0.71437881404683 bayes_pls_golite062009
dodecenoyl-CoA delta-isomerase activity 0.712418056146834 bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing C=C bonds 0.0918189681606029 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [291-679]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGGSGGALAI GCANKMLMLE NAVFYVASPE ACAAILWKTS KAAPEAAEKL RITSKELVKL  60
   61 NVADGIIPEP LGGAHADPSW TSQQIKIAIN ENMNEFGKMS GEELLKHRMA KYRKIGVFIE 120
  121 GEPIEPSRKI NMKKREAVFS DSRKLQGEVD KLKEQILKAK ETSTEAEPSS EVLNEMIEKL 180
  181 KSEIDDEYTE AAIAVGLEER LTAMREEFSK ASSEEHLMHP VLIEKIEKLK EEFNTRLTDA 240
  241 PNYESLKSKL NMLRDFSRAK AASEATSLKK EINKRFQEAV DRPEIREKVE AIKAEVASSG 300
  301 ASSFDELPDA LKEKVLKTKG EVEAEMAGVL KSMGLELDAV KQNQKDTAEQ IYAANENLQE 360
  361 KLEKLNQEIT SKIEEVVRTP EIKSMVELL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.30103
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [680-769]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVETAKASKT PGVTEAYQKI EALEQQIKQK IAEALNTSGL QEKQDELEKE LAAARELAAE  60
   61 ESDGSVKEDD DDDEDSSESG KSEMVNPSFA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.0
Match: 1dg3A
Description: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle