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View Structure Prediction Details

Protein: gi|15221773, gi|...
Organism: Arabidopsis thaliana
Length: 701 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15221773, gi|....

Description E-value Query
Range
Subject
Range
gi|28394005, gi|... - gi|28394005|gb|AAO42410.1| putative lipase [Arabidopsis thaliana], gi|18410487|ref|NP_565075.1| lipa...
724.0 [0..1] [683..1]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRIVDNALA ITKESVKTLT YESLNNIARC INGFSALLLT LLPGKSNVLE GLHGWELRPT  60
   61 LRGPRLPRWM HNGVSSFNHF IHELSVDSDT SSLDYSSGDD DSDGMSTPPS PLSQSSLRSW 120
  121 ASLPANYESH WTDWITFIVW WALLPARILL WVPLYLLRLL ARRNSRMQPL SPGRYQHSSR 180
  181 PCFSKAISGK EHDVPNRTTD KRRGVIEDLQ LGIEIFIETI FDFFHKAAHL LLSPSETFGI 240
  241 VLSWFSSSSH SSKGNYGDVS DDEIIQTAIL GDNDSSLTER RTTTSLYNTD TRTCQDVITE 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [301-701]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGYPYEAIRV VTSDGYGLLL ERIPRRDARK AVYLQHGVMD SSMGWVSNGV VGSPAFAAYD  60
   61 QGYDVFLGNF RGLVSRDHVK KNISSKDFWR YSINEHATED IPAMIEKIHE IKTSELKLYQ 120
  121 PTMEEVVNED QPYKLCVVSH SLGGAAVLMY VITRKIEEKP HRLSRLILLS PAGFHYDSNM 180
  181 CFTLMEYTFL FLGPVLSRIV PAFYIPTKFF RMLLNKLARD FHNYPAVGGL VQTLMSYVVG 240
  241 GDSSNWVGVM GLPHYNMNDM PGISFRVAQH LAQIKHSGKF KMFDYGSSSA NMDVYGSPEP 300
  301 LDLGEFYGLI DVPVDLVAGK KDKVIRPSMV RKHYRVMRDS GVDVSYNEFE YAHLDFTFSH 360
  361 REELLAYVMS RLLLVEPTQT QTVHKKGMKL KKKMETGKPH L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.0
Match: 1hlgA
Description: Gastric lipase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
malate dehydrogenase activity 2.28093794718528 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.97526022885348 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
triglyceride lipase activity 1.2959733599348 bayes_pls_golite062009
hydrolase activity 1.2724013236338 bayes_pls_golite062009
sterol esterase activity 1.21262745914703 bayes_pls_golite062009
thiolester hydrolase activity 1.18565704009692 bayes_pls_golite062009
lipase activity 0.849473630399459 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.569449673299499 bayes_pls_golite062009
carboxylesterase activity 0.424330502936163 bayes_pls_golite062009
acyl-CoA thioesterase activity 0.35429970866093 bayes_pls_golite062009
binding 0.351031277062254 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.264183693934251 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle