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View Structure Prediction Details

Protein: ACL5_ARATH
Organism: Arabidopsis thaliana
Length: 339 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACL5_ARATH.

Description E-value Query
Range
Subject
Range
gi|18150150 - gi|18150150|dbj|BAB83645.1| spermine synthase [Arabidopsis thaliana]
272.0 [0..1] [339..1]

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Predicted Domain #1
Region A:
Residues: [1-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEAVEVMFG NGFPEIHKAT SPTQTLHSNQ QDCHWYEETI DDDLKWSFAL NSVLHQGTSE  60
   61 YQDIALLDTK RFGKVLVIDG KMQSAERDEF IYHECLIHPA LLFHPNPKTV FIMGGGEGSA 120
  121 AREILKHTTI EKVVMCDIDQ EVVDFCRRFL TVNSDAFCNK KLELVIKDAK AELEKREEKF 180
  181 DIIVGDLADP VEGGPCYQLY TKSFYQNILK PKLSPNGIFV TQAGPAGIFT HKEVFTSIYN 240
  241 TMKQVFKYVK AYTAHVPSFA DTWGWVMASD HEFDVEVDEM DRRIEERVNG ELMYLNAPSF 300
  301 VSAATLNKTI SLALEKETEV YSEENARFIH GHGVAYRHI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.69897
Match: 1uirA
Description: Crystal Structure of Polyamine Aminopropyltransfease from Thermus thermophilus
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
spermidine synthase activity 2.31131562815571 bayes_pls_golite062009
transcription regulator activity 1.61435611638306 bayes_pls_golite062009
DNA binding 1.53375495589674 bayes_pls_golite062009
nucleic acid binding 1.31440474302645 bayes_pls_golite062009
catalytic activity 1.25333584501255 bayes_pls_golite062009
transferase activity 1.07321114919891 bayes_pls_golite062009
binding 0.976078016260105 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.837368219068434 bayes_pls_golite062009
N-methyltransferase activity 0.69697643153076 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.644010137949015 bayes_pls_golite062009
methyltransferase activity 0.635463629299812 bayes_pls_golite062009
protein methyltransferase activity 0.57386401278889 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle