| Protein: | FREE1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 601 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FREE1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
414.0 | [0..1] | [598..1] |
|
|
335.0 | [0..242] | [600..1] |
|
|
293.0 | [0..343] | [601..1] |
|
|
268.0 | [0..81] | [601..3] |
|
|
225.0 | [0..263] | [528..1281] |
|
|
224.0 | [0..263] | [528..3234] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MQQGDYNSYY HHQYSQFQNP TPNPNPNPNP SPPAPATVAG PTDLTRNTYA SAPPFTGGYG 60
61 SADYSNYSQN YTPYGQNSEH VPPSAPSFTS PSQPPPSPPA TSLNPNSYST FNQPPPPPTI 120
121 HPQPLSSY
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [129-283] |
1 11 21 31 41 51
| | | | | |
1 GSFDSTAPYQ QPTSQHMYYS PYDQHQTSGY SSAPPPSSAP APNPNPAPYS SSLYSAPPYS 60
61 SGGSSIPPSY EKPSVKFDQS GYDGYNRSRS DLGSDLYGKR SDSGEYPAFE DSYGDGVYAY 120
121 QGGKVEPYGS RGTAPKSSNS TLFDDYGRSI SFSSS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [284-363] |
1 11 21 31 41 51
| | | | | |
1 GRDSSVSSNS AKIVRAVPKA DVQEDSTGGV QKFRVKLLAE TYGQTTTDVL CQIGLDGLRM 60
61 LDPSTSRTLR IYPLENITRC
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [364-523] |
1 11 21 31 41 51
| | | | | |
1 EKLDSSILAF WSKTPVDIEA KRIRLQSNSY TTNTLLDTVT AAMFQAKEIG GSSRPPTSGK 60
61 LIEQTAEKKK GLGDWMNIIK PVNEEKDHWV PDEAVSKCTS CGSDFGAFIR RHHCRNCGDV 120
121 FCDKCTQGRI ALTAEDNAPQ VRVCDRCMAE VSQRLSNAKE
|
| Detection Method: | |
| Confidence: | 26.09691 |
| Match: | 1dvpA |
| Description: | Hrs |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [524-601] |
1 11 21 31 41 51
| | | | | |
1 TTGRNVSLQS HEDLARKLQE EMERNRKSSS GLREGSGRRM KEVACPTCTV HLQVQVPVSG 60
61 SETIECGVCQ NPFLVSAH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.790 | d.24.1 | Pili subunits |
| View | Download | 0.724 | d.18.1 | ssDNA-binding transcriptional regulator domain |
| View | Download | 0.651 | d.24.1 | Pili subunits |
| View | Download | 0.620 | d.24.1 | Pili subunits |
| View | Download | 0.608 | d.18.1 | ssDNA-binding transcriptional regulator domain |
| View | Download | 0.597 | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.553 | d.68.8 | Description not found. |
| View | Download | 0.476 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.453 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.432 | d.169.1 | C-type lectin-like |
| View | Download | 0.399 | c.102.1 | Cell-division inhibitor MinC, N-terminal domain |
| View | Download | 0.319 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.313 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.286 | d.93.1 | SH2 domain |
