| Protein: | gi|18412808, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 306 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18412808, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
372.0 | [0..1] | [304..1] |
|
|
185.0 | [0..73] | [280..88] |
|
|
177.0 | [0..29] | [184..545] |
|
|
175.0 | [0..10] | [184..407] |
|
|
172.0 | [0..11] | [184..415] |
|
|
171.0 | [0..29] | [182..528] |
|
|
170.0 | [0..11] | [183..437] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MIGIGRTLTS SSPSKIILED LPPGIYRYGT EIFTSVPRKT FHHIKFLRLD SAQSSRILKP 60
61 VPLRSSSIKD SQVNVEDEEI EASNKTVRVR FQLRKECVFG EHFFIVGDDP VFGGLWDPET 120
121 ALPLNWSDGN VWTVDLDLPV GRLVEFKLLL KAQTGEILWQ PGPNRALETW ETNKTIRICE 180
181 DWD
|
| Detection Method: |  |
| Confidence: | 44.522879 |
| Match: | 1cygA |
| Description: | CYCLODEXTRIN GLUCANOTRANSFERASE (E.C.2.4.1.19) (CGTASE) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [184-306] |
1 11 21 31 41 51
| | | | | |
1 NADLQMMIEE DFVPYTNISS IGSEDEDEVL GSVQQNSSVV AVENAGYVSD ESAQNSSFSI 60
61 QSEKTMEPSN GALTAREVIK EAMFTEEESP VLVPGLIPLS DLDNEQVEVI NEGKAETFPE 120
121 VIT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.445 | N/A | N/A | d.37.1 | CBS-domain |
| View | Download | 0.417 | N/A | N/A | d.37.1 | CBS-domain |
| View | Download | 0.414 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.354 | N/A | N/A | f.56.1 | Description not found. |
| View | Download | 0.339 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.285 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.257 | N/A | N/A | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.230 | N/A | N/A | d.125.1 | Ornithine decarboxylase C-terminal domain |
| View | Download | 0.207 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
