| Protein: | RPT2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 593 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPT2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
548.0 | [0..1] | [593..1] |
|
|
523.0 | [0..1] | [578..1] |
|
|
503.0 | [0..8] | [549..3] |
|
|
502.0 | [0..22] | [576..63] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MATEGKNPIN MNSMSSSLAR TGQWVFSQDI PTDVVVEVGE ANFSLHKFML VAKSNYIRKL 60
61 IMESKDSDVT RINLSDIPGG PEIFEKAAKF CYGVNFEITV QNVAALHCAA EFLQMTDKYC 120
121 DNNLAGRTQD FLSQVALSSL SGAIVVLKSC EILLPISRDL
|
| Detection Method: |  |
| Confidence: | 23.30103 |
| Match: | 2nn2A |
| Description: | No description for 2nn2A was found. |
|
Region A: Residues: [161-327] |
1 11 21 31 41 51
| | | | | |
1 GIVRRCVDVV GAKACNEAMF PCRTPPNWWT EELCILDVDF FSDVVSSMKQ RGVKPSSLAS 60
61 AIITYTEKSL RDLVRDHSGR GVKYSDPGDN ESDERSQQRD LVQSIVSLLP SDKGLFPVNF 120
121 LCSLLRCAVF LDTSLTCKNE LEKRISVVLE HVSVDDLLIP SFTYDGE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [328-420] |
1 11 21 31 41 51
| | | | | |
1 RLLDLDSVRR IISAFVEKEK NVGVFNGGDF NRGVCSVSLQ RVAKTVDSYL AEIATYGDLT 60
61 ISKFNAIANL VPKSARKSDD DLYRAIDIFL KAH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.704 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.694 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.663 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.640 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.595 | a.7.16 | Description not found. |
| View | Download | 0.577 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.550 | a.47.2 | t-snare proteins |
| View | Download | 0.528 | a.7.7 | BAG domain |
| View | Download | 0.501 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.498 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
|
Region A: Residues: [421-483] |
1 11 21 31 41 51
| | | | | |
1 PNLDEIEREK VCSSMDPLKL SYDARLHASQ NKRLPVNIVL HALYYDQLKL RSGVAEQEER 60
61 AVV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.766 | N/A | N/A | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.766 | N/A | N/A | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.758 | N/A | N/A | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.637 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.636 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.617 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.587 | N/A | N/A | a.251.1 | Description not found. |
| View | Download | 0.552 | N/A | N/A | a.60.12 | DNA polymerase beta-like, second domain |
| View | Download | 0.508 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.508 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.422 | N/A | N/A | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.220 | N/A | N/A | d.76.2 | Description not found. |
|
Region A: Residues: [484-593] |
1 11 21 31 41 51
| | | | | |
1 VLPEALKTRS QLQADTTLAK ENEALRSELM KMKMYVSDMQ KNKNGAGASS SNSSSLVSSK 60
61 KSKHTFFSSV SKKLGKLNPF KNGSKDTSHI DEDLGGVDIT KPRRRRFSIS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
