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Protein Overview: RPT2_ARATH

General Information:
Name(s) found: RPT2_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 593 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: phototropism [IMP]
    Molecular Function: protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATEGKNPIN MNSMSSSLAR TGQWVFSQDI PTDVVVEVGE ANFSLHKFML VAKSNYIRKL  60
   61 IMESKDSDVT RINLSDIPGG PEIFEKAAKF CYGVNFEITV QNVAALHCAA EFLQMTDKYC 120
  121 DNNLAGRTQD FLSQVALSSL SGAIVVLKSC EILLPISRDL GIVRRCVDVV GAKACNEAMF 180
  181 PCRTPPNWWT EELCILDVDF FSDVVSSMKQ RGVKPSSLAS AIITYTEKSL RDLVRDHSGR 240
  241 GVKYSDPGDN ESDERSQQRD LVQSIVSLLP SDKGLFPVNF LCSLLRCAVF LDTSLTCKNE 300
  301 LEKRISVVLE HVSVDDLLIP SFTYDGERLL DLDSVRRIIS AFVEKEKNVG VFNGGDFNRG 360
  361 VCSVSLQRVA KTVDSYLAEI ATYGDLTISK FNAIANLVPK SARKSDDDLY RAIDIFLKAH 420
  421 PNLDEIEREK VCSSMDPLKL SYDARLHASQ NKRLPVNIVL HALYYDQLKL RSGVAEQEER 480
  481 AVVVLPEALK TRSQLQADTT LAKENEALRS ELMKMKMYVS DMQKNKNGAG ASSSNSSSLV 540
  541 SSKKSKHTFF SSVSKKLGKL NPFKNGSKDT SHIDEDLGGV DITKPRRRRF SIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] PSI-BLAST 23.30103 No description for 2nn2A was found.
    2 View Details [161..327] MSA 6.563991 View MSA. No confident structure predictions are available.
    3 View Details [328..420] deduced N/A No confident structure predictions are available.
    4 View Details [421..483] MSA 2.073985 View MSA. No confident structure predictions are available.
    5 View Details [484..593] MSA 2.066989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle