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View Structure Prediction Details

Protein: gi|16805258, gi|...
Organism: Plasmodium falciparum 3D7
Length: 518 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16805258, gi|....

Description E-value Query
Range
Subject
Range
gi|82705915 - gi|82705915|ref|XP_727166.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23482878 - gi|23482878|gb|EAA18731.1| hypothetical protein [Plasmodium yoelii yoelii]
651.0 [0..1] [518..3]
gi|68070851 - gi|68070851|ref|XP_677339.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497416 - gi|56497416|emb|CAH98095.1| conserved hypothetical protein [Plasmodium berghei]
622.0 [0..16] [518..1]
gi|23615501, gi|... - gi|23619294|ref|NP_705256.1| hypothetical protein, conserved in P. falciparum [Plasmodium falciparum...
596.0 [0..1] [512..1]
gi|70953927 - gi|70953927|ref|XP_746035.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526535 - gi|56526535|emb|CAH76908.1| conserved hypothetical protein in P. falciparum [Plasmodium chabaudi cha...
586.0 [0..1] [512..1]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVFSIFKK KRNKKTKLYK TSTNKGNTKR GILMNDKSRR KAYGTPSAKD SIYGEKNIKI  60
   61 TNNSNNNNNN KNNNKISNNN KNNNISNNTN YHDLYDDDTI NRNNQQEVNI VLENFPKLPI 120
  121 KNVELCEDIY NIFYIRDQYL IGNKNILINN DHIILLETIL DKIENAINDM MHREDLYCTK 180
  181 KVLSSVHEKM LCLYNSFKNI KSM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [204-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPQLSNSYDC FKSNVIFIKA KQFKKNYVYD NLINIYTYLQ DSEIQQDNIE VYNEILYIND  60
   61 KQISSPSFIN KNMLTTNDYI EFLPMKFNTH FIELNKISVY YLY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [307-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EESMNHIIWQ KVLDELIVVK ALADIPYFDL TEIEGFDFKK MKSGQRQWYP IYIAKELSDE  60
   61 GLATVEFPFW FYIDNLKHIY KKEFDDINEL TDLPSPFFFE ISSMFLENNC FKNSTPIETI 120
  121 GQRTPYKYIL KVAGLIQDIR QKRIYKIMNK IKSCDIFSEI LMINNIQIYE TYCVNYLASV 180
  181 FFQKNTSTNS FDESFDIRNY LFDPFIFSSY NT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.61
Match: 2q9qA
Description: No description for 2q9qA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle