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View Structure Prediction Details

Protein: gi|16805258, gi|...
Organism: Plasmodium falciparum 3D7
Length: 518 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16805258, gi|....

Description E-value Query
Range
Subject
Range
gi|82705915 - gi|82705915|ref|XP_727166.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23482878 - gi|23482878|gb|EAA18731.1| hypothetical protein [Plasmodium yoelii yoelii]
651.0 [0..1] [518..3]
gi|68070851 - gi|68070851|ref|XP_677339.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497416 - gi|56497416|emb|CAH98095.1| conserved hypothetical protein [Plasmodium berghei]
622.0 [0..16] [518..1]
gi|23615501, gi|... - gi|23619294|ref|NP_705256.1| hypothetical protein, conserved in P. falciparum [Plasmodium falciparum...
596.0 [0..1] [512..1]
gi|70953927 - gi|70953927|ref|XP_746035.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526535 - gi|56526535|emb|CAH76908.1| conserved hypothetical protein in P. falciparum [Plasmodium chabaudi cha...
586.0 [0..1] [512..1]

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Predicted Domain #1
Region A:
Residues: [1-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVFSIFKK KRNKKTKLYK TSTNKGNTKR GILMNDKSRR KAYGTPSAKD SIYGEKNIKI  60
   61 TNNSNNNNNN KNNNKISNNN KNNNISNNTN YHDLYDDDTI NRNNQQEVNI VLENFPKLPI 120
  121 KNVELCEDIY NIFYIRDQYL IGNKNILINN DHIILLETIL DKIENAINDM MHREDLYCTK 180
  181 KVLSSVHEKM LCLYNSFKNI KSM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [204-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPQLSNSYDC FKSNVIFIKA KQFKKNYVYD NLINIYTYLQ DSEIQQDNIE VYNEILYIND  60
   61 KQISSPSFIN KNMLTTNDYI EFLPMKFNTH FIELNKISVY YLY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [307-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EESMNHIIWQ KVLDELIVVK ALADIPYFDL TEIEGFDFKK MKSGQRQWYP IYIAKELSDE  60
   61 GLATVEFPFW FYIDNLKHIY KKEFDDINEL TDLPSPFFFE ISSMFLENNC FKNSTPIETI 120
  121 GQRTPYKYIL KVAGLIQDIR QKRIYKIMNK IKSCDIFSEI LMINNIQIYE TYCVNYLASV 180
  181 FFQKNTSTNS FDESFDIRNY LFDPFIFSSY NT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.61
Match: 2q9qA
Description: No description for 2q9qA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle