YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|4494021, gi|1...
Organism: Plasmodium falciparum 3D7
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4494021, gi|1....

Description E-value Query
Range
Subject
Range
gi|86171923, gi|... - gi|86171923|ref|XP_966306.1| RIFIN [Plasmodium falciparum 3D7], gi|46361275|emb|CAG25139.1| rifin [P...
416.0 [0..1] [326..1]
gi|5901723 - gi|5901723|gb|AAD55383.1|AF161311_1 variant surface antigen rifin 3 [Plasmodium falciparum]
408.0 [0..1] [326..1]

Back

Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHYINILL FELPLNILIY NQRNHYITRT PKATTRTLCE CELYAPSNYD SDPEMKRVMQ  60
   61 QF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [63-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDRTTQRFHE YDERMKTTRQ KCKEQCDKEI QKIILKDKLE KQMAQQLTTL DPNITTEDIP  60
   61 TCICEKSLAD KTEKFCLNCG KTMGGVAPGW GLVSGLGYVG WTNYVTQTAL QKGIEAGVKA 120
  121 GIEELKGFPG LRKLIKVSQI QSFINPAN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [211-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YAEETTYFNF IKQVENTKCV VKEHTFCYST YISKENALSQ RASEIAKNAA DMAKLAEREV  60
   61 LDKAAPVTSG LNTAIIASIV AILVIVLVMI IIYLFLRYRK NKKMKKKLQY IKLLEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle