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View Structure Prediction Details

Protein: gi|4494021, gi|1...
Organism: Plasmodium falciparum 3D7
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|4494021, gi|1....

Description E-value Query
Range
Subject
Range
gi|86171923, gi|... - gi|86171923|ref|XP_966306.1| RIFIN [Plasmodium falciparum 3D7], gi|46361275|emb|CAG25139.1| rifin [P...
416.0 [0..1] [326..1]
gi|5901723 - gi|5901723|gb|AAD55383.1|AF161311_1 variant surface antigen rifin 3 [Plasmodium falciparum]
408.0 [0..1] [326..1]

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Predicted Domain #1
Region A:
Residues: [1-62]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHYINILL FELPLNILIY NQRNHYITRT PKATTRTLCE CELYAPSNYD SDPEMKRVMQ  60
   61 QF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.633 N/A N/A b.34.1 C-terminal domain of transcriptional repressors
View Download 0.494 N/A N/A d.9.2 Description not found.
View Download 0.400 N/A N/A b.38.1 Sm-like ribonucleoproteins
View Download 0.391 N/A N/A g.41.3 Zinc beta-ribbon
View Download 0.390 N/A N/A d.9.2 Description not found.

Predicted Domain #2
Region A:
Residues: [63-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDRTTQRFHE YDERMKTTRQ KCKEQCDKEI QKIILKDKLE KQMAQQLTTL DPNITTEDIP  60
   61 TCICEKSLAD KTEKFCLNCG KTMGGVAPGW GLVSGLGYVG WTNYVTQTAL QKGIEAGVKA 120
  121 GIEELKGFPG LRKLIKVSQI QSFINPAN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [211-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YAEETTYFNF IKQVENTKCV VKEHTFCYST YISKENALSQ RASEIAKNAA DMAKLAEREV  60
   61 LDKAAPVTSG LNTAIIASIV AILVIVLVMI IIYLFLRYRK NKKMKKKLQY IKLLEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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