| Protein: | gi|113594810, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 760 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113594810, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
504.0 | [0..14] | [415..12] |
|
|
456.0 | [0..12] | [760..4] |
|
|
391.0 | [0..12] | [760..4] |
|
|
157.0 | [0..421] | [759..180] |
|
|
152.0 | [0..421] | [757..179] |
|
Region A: Residues: [1-304] |
1 11 21 31 41 51
| | | | | |
1 MATRGGGGGG GGKEAKGKVM GPLFPRLHVN DAAKGGGPRA PPRNKMALYE QFTVPSHRFS 60
61 GGGGGGGVGG SPAHSTSAAS QSQSQSQVYG RDSSLFQPFN VPSNRPGHST EKINSDKINK 120
121 KISGSRKELG MLSSQTKGMD IYASRSTAEA PQRRAENTIK SSSGKRLADD DEFMVPSVFN 180
181 SRFPQYSTQE NAGVQDQSTP LVAANPHKSP STVSKSSTKC YNTVSKKLER IHVSDVKSRT 240
241 PLKDKEMEAA QTSKNVEVEK SSSFHASKDM FESRHAKVYP KMDKTGIIND SDEPHGGNSG 300
301 HQAT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [305-428] |
1 11 21 31 41 51
| | | | | |
1 SRNGGSMKFQ NPPMRRNEIS SNPSSENTDR HYNLPQGGIE ETGTKRKRLL EQHDAEKSDD 60
61 VSRLLEQHDA ENIDDVSDSS VECITGWEIS PDKIVGAIGT KHFWKARRAI MNQQRVFAVQ 120
121 VFEL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.258 | d.106.1 | Sterol carrier protein, SCP |
| View | Download | 0.254 | d.106.1 | Sterol carrier protein, SCP |
| View | Download | 0.254 | d.106.1 | Sterol carrier protein, SCP |
| View | Download | 0.202 | d.106.1 | Sterol carrier protein, SCP |
|
Region A: Residues: [429-510] |
1 11 21 31 41 51
| | | | | |
1 HKLVKVQKLI AASPHVLIES DPCLGNALLG SKNKLVEENL KAQPLLVATI DDVEPSLQQP 60
61 EVSKENTEDS PPSPHDTGLG SG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [511-681] |
1 11 21 31 41 51
| | | | | |
1 QRDQAATNGV SKSNRRATPV ASDNKQNNWG VQLQPPQNQW LVPVMSPLEG LVYKPYSGPC 60
61 PPAGSILAPF YANCTPLSLP STAGDFMNSA YGVPMPHQPQ HMGAPGPPSM PMNYFPPFSI 120
121 PVMNPTAPAP VVEQGRHPSM PQPYGNFEQQ SWISCNMSHP SGIWRFHASR D
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [682-760] |
1 11 21 31 41 51
| | | | | |
1 SEAQASSASS PFDRFQCSGS GPVSAFPTVS AQNNQPQPSY SSRDNQTNVI KVVPHNSRTA 60
61 SESAARIFRS IQMERQRDD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
