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Protein Overview: gi|113594810, gi...

General Information:
Name(s) found: gi|5803261 [NCBI NR]
gi|50948761 [NCBI NR]
gi|125596014 [NCBI NR]
gi|115466342 [NCBI NR]
gi|113594810 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|5803261|dbj|BAA83571.1| putative early flowering 3 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|50948761|ref|XP_493738.1| putative early flowering 3 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|125596014|gb|EAZ35794.1| hypothetical protein OsJ_20086 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115466342|ref|NP_001056770.1| Os06g0142600 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113594810|dbj|BAF18684.1| Os06g0142600 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 760 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRGGGGGG GGKEAKGKVM GPLFPRLHVN DAAKGGGPRA PPRNKMALYE QFTVPSHRFS  60
   61 GGGGGGGVGG SPAHSTSAAS QSQSQSQVYG RDSSLFQPFN VPSNRPGHST EKINSDKINK 120
  121 KISGSRKELG MLSSQTKGMD IYASRSTAEA PQRRAENTIK SSSGKRLADD DEFMVPSVFN 180
  181 SRFPQYSTQE NAGVQDQSTP LVAANPHKSP STVSKSSTKC YNTVSKKLER IHVSDVKSRT 240
  241 PLKDKEMEAA QTSKNVEVEK SSSFHASKDM FESRHAKVYP KMDKTGIIND SDEPHGGNSG 300
  301 HQATSRNGGS MKFQNPPMRR NEISSNPSSE NTDRHYNLPQ GGIEETGTKR KRLLEQHDAE 360
  361 KSDDVSRLLE QHDAENIDDV SDSSVECITG WEISPDKIVG AIGTKHFWKA RRAIMNQQRV 420
  421 FAVQVFELHK LVKVQKLIAA SPHVLIESDP CLGNALLGSK NKLVEENLKA QPLLVATIDD 480
  481 VEPSLQQPEV SKENTEDSPP SPHDTGLGSG QRDQAATNGV SKSNRRATPV ASDNKQNNWG 540
  541 VQLQPPQNQW LVPVMSPLEG LVYKPYSGPC PPAGSILAPF YANCTPLSLP STAGDFMNSA 600
  601 YGVPMPHQPQ HMGAPGPPSM PMNYFPPFSI PVMNPTAPAP VVEQGRHPSM PQPYGNFEQQ 660
  661 SWISCNMSHP SGIWRFHASR DSEAQASSAS SPFDRFQCSG SGPVSAFPTV SAQNNQPQPS 720
  721 YSSRDNQTNV IKVVPHNSRT ASESAARIFR SIQMERQRDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..304] deduced N/A No confident structure predictions are available.
    2 View Details [305..428] deduced N/A No confident structure predictions are available.
    3 View Details [429..510] deduced N/A No confident structure predictions are available.
    4 View Details [511..681] PSI-BLAST 7.0 Sec24
    5 View Details [682..760] MSA 2.218997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle