| Protein: | gi|113594729, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 542 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113594729, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
329.0 | [0..32] | [539..1] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MRRSGNGGAA KKKKKRSASA ASERRPRADG GMRIVVPLQG VVQGRGGLVL GSLIPCALFY 60
61 FFQLYIKRNR ASPPPPP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [78-542] |
1 11 21 31 41 51
| | | | | |
1 GSPTAASAAA VSPIHRSLSR GLLAPRAALP AISARGASVR DDDSLYYAGL RRCAADPYHP 60
61 VTNPSGIIQL GLAENYLSLD LVGRWMEEHA AEAASMAGGE DEDERELSIR GLAAYQPYDG 120
121 ILALKMALAG FMRQIMQGSV SFEPSQVVIT SGATPAMEIL SFCLADPGNA FLVPSPYYPG 180
181 WDRDIKWRTG IELIPVPCRS TDNFNISITA LEIAYNQAKK RGIKVRGVLI SNPNNPTGSF 240
241 VPKQTLHDLL EFAAEKNIHL ISDEVFAGST YGSGKFVSVA EVVDDLEDFD KGRVHIIYGL 300
301 SKDLSLAGFR VGVIYSYNES IVTAAAKIAR FSSVSTPTQR LLVAMLSDQK FISDYLKVNR 360
361 ERLRKMYHLF VDALDQVGIE CYKSSGGFYC WADMSKFIRS YSEKGERKLW DRLLEEAKVN 420
421 VTPGSSCHCI EPGWFRCCFT TLSEHDIPVL VQRLRTITDS HKPNH
|
| Detection Method: | |
| Confidence: | 85.0 |
| Match: | 1m4nA |
| Description: | 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| L-aspartate:2-oxoglutarate aminotransferase activity | 4.43277563699654 | bayes_pls_golite062009 |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.28316822767388 | bayes_pls_golite062009 |
| transaminase activity | 1.24990480711889 | bayes_pls_golite062009 |
| transferase activity | 0.737426388870721 | bayes_pls_golite062009 |
| glycine dehydrogenase (decarboxylating) activity | 0.390162083170876 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | 0.390162083170876 | bayes_pls_golite062009 |
| cystathionine beta-lyase activity | 0.0833010353195099 | bayes_pls_golite062009 |
