| Protein: | POLIB_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1034 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POLIB_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
761.0 | [0..2] | [1033..66] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MGVSLRHLSP SSFWVSRRPR VSSSILSFLV PRRRILCTRK VAIIKGNAGY STATDCGGSH 60
61 GFHHSGHQRS SSVEFSGEWK LNLGSKTARM VPPTVKQAGA VSAWREEVNN KLRGRNREYA 120
121 NNQDDAFGNG SYILKGFVPK IDDVHSYGNG QNFDYNLKPG TDITTLGREL NGFMQTNSIR 180
181 GSV
|
| Detection Method: |  |
| Confidence: | 21.0 |
| Match: | 1exnA |
| Description: | T5 5'-exonuclease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.845290320008287 | bayes_pls_golite062009 |
| hydrolase activity | 0.31554871338907 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.12799711467808 | bayes_pls_golite062009 |
| nuclease activity | 0.0878151841480506 | bayes_pls_golite062009 |
|
Region A: Residues: [184-303] |
1 11 21 31 41 51
| | | | | |
1 VALPSKDIEV GETTDVTLKP LNSDTTLDNA SYKKTATISK VEKCTNLSQV RANLKKIYNR 60
61 VRVVDNVSSA KETVALLMNQ YRNLVHACDT EVSRIDVKTE TPVDHGEMIC FSIYCGSEAD 120
121
|
| Detection Method: | |
| Confidence: | 11.045757 |
| Match: | 2hbjA |
| Description: | No description for 2hbjA was found. |
|
Region A: Residues: [304-1034] |
1 11 21 31 41 51
| | | | | |
1 FGDGKSCIWV DVLGENGRDI LAEFKPFFED SSIKKVWHNY SFDNHIIRNY GIKLSGFHGD 60
61 TMHMARLWDS SRRISGGYSL EALTSDPKVL GGTETKEEAE LFGKISMKKI FGKGKLKKDG 120
121 SEGKLVIIPP VKELQMEDRE AWISYSALDS ISTLKLYESM KKQLQAKKWF LDGKLISKKN 180
181 MFDFYQEYWQ PFGELLAKME SEGMLVDRDY LAQIEIVAKA EQEIAVSRFR NWASKHCPDA 240
241 KHMNVGSDTQ LRQLFFGGIS NSCNDEDLPY EKLFKVPNVD KVIEEGKKRA TKFRNIKLHR 300
301 ISDRPLPTEK FTASGWPSVS GDTLKALAGK VSAEYDYMEG VLDTCLEENI GDDDCISLPD 360
361 EVVETQHVNT SVESDTSAYG TAFDAFGGGE SGKEACHAIA ALCEVCSIDS LISNFILPLQ 420
421 GSNVSGKDGR VHCSLNINTE TGRLSARRPN LQNQPALEKD RYKIRQAFIA SPGNSLIVAD 480
481 YGQLELRILA HLASCESMKE AFIAGGDFHS RTAMNMYPHI REAVENGEVL LEWHPQPGQE 540
541 KPPVPLLKDA FASERRKAKM LNFSIAYGKT AIGLSRDWKV SREEAQDTVN LWYNDRQEVR 600
601 KWQELRKKEA IQKGYVLTLL GRARKFPEYR SRAQKNHIER AAINTPVQGS AADVAMCAML 660
661 EISNNQRLKE LGWKLLLQVH DEVILEGPSE SAENAKDIVV NCMSEPFNGK NILSVDLSVD 720
721 AKCAQNWYAG K
|
| Detection Method: | |
| Confidence: | 139.0 |
| Match: | 1bgxT |
| Description: | 5' to 3' exonuclease domain of DNA polymerase Taq; Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.518931870161593 | bayes_pls_golite062009 |
| transferase activity | 0.35636561630516 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.32441153240842 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.29860211454192 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.0603497936698201 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.0602875211585996 | bayes_pls_golite062009 |
