| Protein: | PAPS4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 741 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAPS4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
739.0 | [0..1] | [738..1] |
|
Region A: Residues: [1-504] |
1 11 21 31 41 51
| | | | | |
1 MMVGTQNLGG SLPPLNSPKS YGITKPLSLA GPSSADIKRN VELEKYLVDE GLYESKDDTM 60
61 RREEVLGRID QIVKHWVKQL TQQRGYTDQM VEDANAVIFT FGSYRLGVHG PGADIDTLCV 120
121 GPSYVNREED FFIILHDILA EMEEVTELHP VPDAHVPVMK FKFQGIPIDL LYASISLLVV 180
181 PQDLDISSSS VLCEVDEPTV RSLNGCRVAD QILKLVPNFE HFRTTLRCLK YWAKKRGVYS 240
241 NVTGFLGGVN WALLVARVCQ LYPNAIPSML VSRFFRVYTQ WRWPNPVMLC AIEEDELGFP 300
301 VWDRRKNHRD RYHLMPIITP AYPCMNSSYN VSQSTLRVMT EQFQFGNNIL QEIELNKQHW 360
361 SSLFEQYMFF EAYKNYLQVD IVAADAEDLL AWKGWVESRF RQLTLKIERD TNGMLMCHPQ 420
421 PNEYVDTARQ FLHCAFFMGL QRAEGVGGQE CQQFDIRGTV DEFRQEVNMY MFWKPGMDVF 480
481 VSHVRRRQLP PFVFPNGYRR PRQS
|
| Detection Method: |  |
| Confidence: | 170.0 |
| Match: | 1f5aA |
| Description: | Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.122769147009 | bayes_pls_golite062009 |
| RNA binding | 1.07207584601969 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.92178707322923 | bayes_pls_golite062009 |
| polynucleotide adenylyltransferase activity | 0.911825870004661 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.667889614569279 | bayes_pls_golite062009 |
| transferase activity | 0.63270331673446 | bayes_pls_golite062009 |
|
Region A: Residues: [505-741] |
1 11 21 31 41 51
| | | | | |
1 RHQNLPGGKS GEDGSVSHSG SVVERHAKRK NDSEMMDVRP EKPEKRASLS PQSLDIVSPE 60
61 NSAITTGWTP PVCNLRRPPS EEIEADNLNT ECTELTDLAR NECNSGSEQV LEVDSMAVVQ 120
121 ECSDPAEPLG KCVTPDSVDV VACVSGQEEN LDRNLRSVSI SGTDSPLLPS RSCGQNRDYE 180
181 GFGFPAANSD PMGKKNLYSQ SGMSEDLQSN SLVSGMEKSE DRARSESFQK SQIRLLT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
