| Protein: | gi|30683629, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 454 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30683629, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
277.0 | [0..9] | [454..34] |
|
Region A: Residues: [1-224] |
1 11 21 31 41 51
| | | | | |
1 MASTLRNIHD QNVIASEDTV YRYLCPVKKT GSIIGKGGEI AKQIRSETKS NMRINEALPG 60
61 CEERVVTMYS TNEELNHFGD DGELVCPALD ALFKVHDMVV ADADQDDGTD DDNDLGEKQT 120
121 VTVRMLVPSD QIGCVIGKGG QVIQNLRNDT NAQIRVIKDH LPACALTLSH DELLLIIGEP 180
181 LVVREALYQV ASLLHDNPSR FQHLLLSSSS SSMHQPGAML MSAA
|
| Detection Method: |  |
| Confidence: | 27.30103 |
| Match: | 2annA |
| Description: | No description for 2annA was found. |
|
Region A: Residues: [225-325] |
1 11 21 31 41 51
| | | | | |
1 LTSSHRNYAV RRDIADAREF CVCFICPAEN VGGVIGKGGG FINQIRQETG ATIRVNTSET 60
61 DDDDCIIFIS SKEFYEDQSP AVNAAIRLQQ RCSEKVGKDA N
|
| Detection Method: | |
| Confidence: | 3.1 |
| Match: | 1x4nA |
| Description: | Solution structure of KH domain in FUSE binding protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.03452983014063 | bayes_pls_golite062009 |
| nucleic acid binding | 0.262255208405772 | bayes_pls_golite062009 |
| RNA binding | 0.11909109768676 | bayes_pls_golite062009 |
|
Region A: Residues: [326-454] |
1 11 21 31 41 51
| | | | | |
1 DLAISTRLLV SSSQIGCLIG KGGAVISEMR SVTRANIRIL QKEDVPKIAR EDEEMVQITG 60
61 SPDAAMKALT QVILRLRANS FDMDHGLVLL PTSFPYIPQV TESSSKSKYA KRDDHSKLNS 120
121 NSKRRNHVS
|
| Detection Method: | |
| Confidence: | 11.045757 |
| Match: | 1khmA |
| Description: | HnRNP K, KH3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.17976146460016 | bayes_pls_golite062009 |
| RNA binding | 0.531188561533869 | bayes_pls_golite062009 |
| nucleic acid binding | 0.517453257444565 | bayes_pls_golite062009 |
